Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02976

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,130,480	+		CCNA_02975	0.56	-1.1
3,130,480	+		CCNA_02975	0.56	-0.4
3,130,480	+		CCNA_02975	0.56	+0.8
3,130,480	+		CCNA_02975	0.56	+0.8
3,130,488	-		CCNA_02975	0.56	+0.7
3,130,509	-		CCNA_02975	0.57	-0.5
3,130,533	+		CCNA_02975	0.59	+0.1
3,130,546	-		CCNA_02975	0.59	+1.8
3,130,547	+		CCNA_02975	0.59	-0.4
3,130,551	+		CCNA_02975	0.60	-1.6
3,130,560	-		CCNA_02975	0.60	-0.9
3,130,560	-		CCNA_02975	0.60	-0.1
3,130,573	+		CCNA_02975	0.61	-0.6
3,130,603	+		CCNA_02975	0.62	+0.7
3,130,605	-		CCNA_02975	0.62	-1.3
3,130,611	-		CCNA_02975	0.63	+0.3
3,130,611	-		CCNA_02975	0.63	-0.4
3,130,620	+		CCNA_02975	0.63	+0.8
3,130,772	-		CCNA_02975	0.71	-0.7
3,130,800	+		CCNA_02975	0.72	-0.1
3,130,822	+		CCNA_02975	0.74	-0.2
3,130,830	-		CCNA_02975	0.74	+0.2
3,130,830	-		CCNA_02975	0.74	-0.3
3,130,830	-		CCNA_02975	0.74	+2.1
3,130,883	+		CCNA_02975	0.77	+1.5
3,130,890	-		CCNA_02975	0.77	-1.5
3,130,891	-		CCNA_02975	0.77	-0.6
3,130,897	-		CCNA_02975	0.78	+1.0
3,130,928	-		CCNA_02975	0.79	-1.4
3,130,938	+		CCNA_02975	0.80	-1.7
3,130,949	+		CCNA_02975	0.80	-0.0
3,131,103	+		CCNA_02975	0.88	-0.6
3,131,162	+				+2.7
3,131,162	+				+1.6
3,131,172	+				+2.6
3,131,172	+				+2.5
3,131,193	-				+1.9
3,131,214	-				+1.4
3,131,232	+				+1.2
3,131,233	+				+0.5
3,131,233	+				+1.5
3,131,234	-				+0.4
3,131,239	+				+2.2
3,131,244	+				+1.5
3,131,247	-				+1.7
3,131,247	-				+1.3
3,131,257	-				+3.8
3,131,262	+				-2.1
3,131,284	-				+2.2
3,131,286	+				+1.8
3,131,286	+				+0.0
3,131,294	-				+2.4
3,131,294	-				+3.0
3,131,294	-				+4.4
3,131,322	+				+0.0
3,131,322	+				+1.3
3,131,324	+				+0.0
3,131,329	+				+1.7
3,131,329	+				+1.1
3,131,330	-				+2.4
3,131,332	-				+2.4
3,131,332	-				+2.5
3,131,335	+				+0.7
3,131,342	-				+2.6
3,131,343	-				+2.2
3,131,345	+				+2.0
3,131,362	+				-0.5
3,131,362	+				+0.2
3,131,371	+				+0.4
3,131,374	-				+2.1
3,131,379	-				+2.1
3,131,391	+				+1.9
3,131,399	-				+1.8
3,131,442	-				+2.6
3,131,468	+				-0.2
3,131,522	+		CCNA_02976	0.12	-1.4
3,131,542	-		CCNA_02976	0.17	+3.0
3,131,545	+		CCNA_02976	0.18	+0.2
3,131,545	+		CCNA_02976	0.18	-2.1
3,131,553	-		CCNA_02976	0.21	+3.1
3,131,553	-		CCNA_02976	0.21	+2.3
3,131,553	-		CCNA_02976	0.21	+3.3
3,131,553	-		CCNA_02976	0.21	+2.6
3,131,558	+		CCNA_02976	0.22	+0.5
3,131,558	+		CCNA_02976	0.22	+0.8
3,131,558	+		CCNA_02976	0.22	-0.0
3,131,560	-		CCNA_02976	0.23	+3.3
3,131,566	-		CCNA_02976	0.24	+2.8
3,131,586	-		CCNA_02976	0.30	+2.9
3,131,648	+		CCNA_02976	0.47	-0.9
3,131,656	-		CCNA_02976	0.49	+2.2
3,131,656	-		CCNA_02976	0.49	-0.2
3,131,659	+				+1.2
3,131,667	-		CCNA_02976	0.52	+3.1
3,131,681	+		CCNA_02976	0.56	-0.8
3,131,728	-		CCNA_02976	0.69	+1.7
3,131,747	-		CCNA_02976	0.74	+1.7
3,131,769	-		CCNA_02976	0.81	+2.6
3,131,800	+		CCNA_02976	0.89	+1.8
3,131,805	+				+0.5
3,131,809	+				+0.8
3,131,809	+				+0.7
3,131,813	-				+0.6
3,131,813	-				+2.0
3,131,815	-				+1.1
3,131,817	-				+1.2
3,131,817	-				+2.9
3,131,817	-				+0.6
3,131,817	-				+1.2
3,131,853	+				-1.6
3,132,008	+				-0.9
3,132,009	+				-1.9
3,132,074	-				-1.2
3,132,075	+				+0.9
3,132,083	-				-0.0
3,132,091	+				+1.3
3,132,126	-		CCNA_02977	0.11	+1.8
3,132,127	-		CCNA_02977	0.11	+0.5
3,132,189	+		CCNA_02977	0.22	-0.0
3,132,189	+		CCNA_02977	0.22	-1.4
3,132,189	+		CCNA_02977	0.22	+0.1
3,132,194	+		CCNA_02977	0.23	+1.2
3,132,194	+		CCNA_02977	0.23	+0.9
3,132,194	+		CCNA_02977	0.23	-0.7
3,132,194	+		CCNA_02977	0.23	-0.7
3,132,197	-		CCNA_02977	0.24	-2.2
3,132,202	-		CCNA_02977	0.24	+0.8
3,132,202	-		CCNA_02977	0.24	-0.9
3,132,248	-		CCNA_02977	0.32	-0.1
3,132,250	+		CCNA_02977	0.33	+1.5
3,132,258	-		CCNA_02977	0.34	+2.1
3,132,269	+		CCNA_02977	0.36	-2.0
3,132,269	+		CCNA_02977	0.36	+1.8
3,132,309	-		CCNA_02977	0.43	+0.5
3,132,311	+		CCNA_02977	0.44	-1.1
3,132,312	+		CCNA_02977	0.44	+1.2
3,132,320	-		CCNA_02977	0.45	+1.8
3,132,336	+		CCNA_02977	0.48	+1.8
3,132,347	+		CCNA_02977	0.50	-1.4
3,132,355	-		CCNA_02977	0.51	+1.2
3,132,383	+		CCNA_02977	0.56	-0.7
3,132,394	+		CCNA_02977	0.58	-0.5
3,132,397	-		CCNA_02977	0.59	+1.2
3,132,434	+		CCNA_02977	0.65	+1.1
3,132,498	+		CCNA_02977	0.76	+1.1
3,132,498	+		CCNA_02977	0.76	+2.8
3,132,498	+		CCNA_02977	0.76	-2.8
3,132,506	-		CCNA_02977	0.78	+0.2
3,132,506	-		CCNA_02977	0.78	+0.5
3,132,506	-		CCNA_02977	0.78	+0.2
3,132,506	-		CCNA_02977	0.78	-2.5
3,132,506	-		CCNA_02977	0.78	+1.2
3,132,542	+		CCNA_02977	0.84	+0.7
3,132,587	+				+0.4
3,132,587	+				+0.8
3,132,593	+				+0.9
3,132,642	+				+2.2
3,132,650	-				+0.5
3,132,665	-				+0.8
3,132,665	-				-2.0
3,132,665	-				+1.2
3,132,674	-				+1.2
3,132,678	+				-0.0
3,132,700	-				+0.8
3,132,712	+				-0.4
3,132,712	+				-1.4
3,132,712	+				+0.9
3,132,740	+				+0.8
3,132,741	+				-1.0
3,132,750	-				+2.8
3,132,751	+				+2.2
3,132,778	-				-0.7