Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02957

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,114,683	-		CCNA_02955	0.37	-0.1
3,114,767	+		CCNA_02955	0.47	-0.5
3,114,767	+		CCNA_02955	0.47	-1.6
3,114,775	-		CCNA_02955	0.48	+0.4
3,114,775	-		CCNA_02955	0.48	-2.6
3,114,775	-		CCNA_02955	0.48	+0.0
3,114,775	-		CCNA_02955	0.48	-1.4
3,114,847	+		CCNA_02955	0.58	+0.0
3,114,847	+		CCNA_02955	0.58	-1.3
3,114,855	-		CCNA_02955	0.59	+1.2
3,114,857	+		CCNA_02955	0.59	+0.3
3,114,857	+		CCNA_02955	0.59	+0.0
3,114,888	+		CCNA_02955	0.63	+2.6
3,114,895	-		CCNA_02955	0.64	-0.1
3,114,933	-		CCNA_02955	0.69	+0.2
3,114,940	+		CCNA_02955	0.70	+0.8
3,114,940	+		CCNA_02955	0.70	-1.7
3,114,964	-		CCNA_02955	0.73	-1.0
3,114,964	-		CCNA_02955	0.73	+0.2
3,114,965	+		CCNA_02955	0.73	+3.3
3,114,971	+		CCNA_02955	0.74	+0.5
3,114,971	+		CCNA_02955	0.74	+0.3
3,114,971	+		CCNA_02955	0.74	+2.4
3,114,971	+		CCNA_02955	0.74	-0.8
3,114,971	+		CCNA_02955	0.74	-0.5
3,114,971	+		CCNA_02955	0.74	-0.5
3,114,971	+		CCNA_02955	0.74	-0.3
3,114,971	+		CCNA_02955	0.74	+1.8
3,114,971	+		CCNA_02955	0.74	+0.8
3,114,971	+		CCNA_02955	0.74	-0.2
3,114,971	+		CCNA_02955	0.74	+0.5
3,114,979	-		CCNA_02955	0.75	+0.4
3,114,979	-		CCNA_02955	0.75	+0.7
3,114,979	-		CCNA_02955	0.75	+0.0
3,114,979	-		CCNA_02955	0.75	-0.2
3,114,979	-		CCNA_02955	0.75	-0.7
3,114,979	-		CCNA_02955	0.75	-1.1
3,114,979	-		CCNA_02955	0.75	+1.8
3,114,979	-		CCNA_02955	0.75	+3.2
3,114,979	-		CCNA_02955	0.75	+1.2
3,114,979	-		CCNA_02955	0.75	-0.0
3,114,979	-		CCNA_02955	0.75	-0.9
3,114,979	-		CCNA_02955	0.75	+1.2
3,114,979	-		CCNA_02955	0.75	-0.6
3,114,979	-		CCNA_02955	0.75	-1.9
3,114,979	-		CCNA_02955	0.75	+1.4
3,114,979	-		CCNA_02955	0.75	+1.9
3,114,979	-		CCNA_02955	0.75	-1.0
3,114,979	-		CCNA_02955	0.75	+0.2
3,114,979	-		CCNA_02955	0.75	+0.0
3,114,979	-		CCNA_02955	0.75	-1.3
3,115,070	-		CCNA_02955	0.87	+3.8
3,115,072	-		CCNA_02955	0.87	-0.5
3,115,113	-				+1.1
3,115,120	-				-0.3
3,115,123	-				-1.9
3,115,123	-				-0.3
3,115,149	-				+0.4
3,115,153	+				+0.8
3,115,205	+				-1.9
3,115,217	+				-1.3
3,115,218	-				+0.8
3,115,264	-		CCNA_02956	0.16	+1.6
3,115,264	-		CCNA_02956	0.16	+0.3
3,115,264	-		CCNA_02956	0.16	+1.8
3,115,264	-		CCNA_02956	0.16	+1.1
3,115,264	-		CCNA_02956	0.16	-0.4
3,115,264	-		CCNA_02956	0.16	+1.6
3,115,295	-		CCNA_02956	0.22	+0.8
3,115,313	+		CCNA_02956	0.25	+0.8
3,115,326	-		CCNA_02956	0.28	+1.5
3,115,326	-		CCNA_02956	0.28	-1.1
3,115,331	-		CCNA_02956	0.28	-0.2
3,115,331	-		CCNA_02956	0.28	+0.4
3,115,347	+		CCNA_02956	0.31	+0.5
3,115,360	-		CCNA_02956	0.34	-1.9
3,115,383	+		CCNA_02956	0.38	+0.0
3,115,434	-		CCNA_02956	0.48	-0.9
3,115,444	+		CCNA_02956	0.50	+1.3
3,115,461	+		CCNA_02956	0.53	-1.3
3,115,466	+		CCNA_02956	0.54	-1.7
3,115,469	-		CCNA_02956	0.54	+0.3
3,115,469	-		CCNA_02956	0.54	+2.8
3,115,469	-		CCNA_02956	0.54	-0.1
3,115,474	-		CCNA_02956	0.55	-0.9
3,115,474	-		CCNA_02956	0.55	+0.4
3,115,480	-		CCNA_02956	0.56	-0.2
3,115,518	+		CCNA_02956	0.63	-0.6
3,115,546	+		CCNA_02956	0.69	-0.3
3,115,554	-		CCNA_02956	0.70	-1.3
3,115,566	+		CCNA_02956	0.72	-1.9
3,115,583	+		CCNA_02956	0.75	+0.1
3,115,664	+				-1.6
3,115,664	+				-0.6
3,115,667	-				+0.9
3,115,686	-				-1.5
3,115,710	+				-0.7
3,115,710	+				-2.0
3,115,735	+		CCNA_02957	0.15	-0.0
3,115,774	-		CCNA_02957	0.26	+2.9
3,115,818	-		CCNA_02957	0.38	+3.8
3,115,858	-		CCNA_02957	0.49	+2.9
3,115,881	-		CCNA_02957	0.55	+3.7
3,115,890	-		CCNA_02957	0.58	+3.6
3,115,902	-		CCNA_02957	0.61	+3.4
3,116,010	-				-0.1
3,116,106	+				-0.5
3,116,106	+				-0.1
3,116,115	-				-0.9
3,116,146	+				+0.5
3,116,187	+				+0.3
3,116,247	+		CCNA_02959	0.15	-1.2
3,116,307	-		CCNA_02959	0.22	+1.8
3,116,307	-		CCNA_02959	0.22	+2.4
3,116,333	-		CCNA_02959	0.25	-0.3
3,116,400	+		CCNA_02959	0.33	-0.9
3,116,439	-		CCNA_02959	0.38	+2.3
3,116,464	+		CCNA_02959	0.40	+1.8
3,116,464	+		CCNA_02959	0.40	-0.2
3,116,522	-		CCNA_02959	0.47	+0.5
3,116,591	+		CCNA_02959	0.55	+1.3
3,116,601	+		CCNA_02959	0.56	-0.3
3,116,604	-		CCNA_02959	0.57	-1.0
3,116,609	-		CCNA_02959	0.57	+0.7
3,116,609	-		CCNA_02959	0.57	-0.6
3,116,661	+		CCNA_02959	0.63	-0.3
3,116,661	+		CCNA_02959	0.63	-0.5
3,116,669	-		CCNA_02959	0.64	-0.2
3,116,680	+		CCNA_02959	0.66	+1.5
3,116,680	+		CCNA_02959	0.66	-0.3
3,116,688	-		CCNA_02959	0.66	+0.8
3,116,688	-		CCNA_02959	0.66	+2.8
3,116,688	-		CCNA_02959	0.66	+1.8
3,116,688	-		CCNA_02959	0.66	-1.1
3,116,776	+		CCNA_02959	0.77	-1.5
3,116,799	-		CCNA_02959	0.79	-2.1
3,116,799	-		CCNA_02959	0.79	+0.5
3,116,812	+		CCNA_02959	0.81	-1.1
3,116,815	-		CCNA_02959	0.81	-1.4
3,116,823	+		CCNA_02959	0.82	+0.8
3,116,836	+		CCNA_02959	0.84	-1.5
3,116,841	+		CCNA_02959	0.84	+0.3
3,116,844	-		CCNA_02959	0.85	+0.0
3,116,869	+		CCNA_02959	0.87	-1.7
3,116,870	+		CCNA_02959	0.88	-0.2
3,116,872	-		CCNA_02959	0.88	-0.2
3,116,878	-		CCNA_02959	0.89	+0.5
3,116,956	+				+0.8
3,116,971	+				-0.4
3,116,971	+				-0.3
3,116,971	+				+0.2
3,116,978	-				+0.8
3,116,979	-				-0.6
3,116,979	-				+2.8
3,116,979	-				-0.3
3,116,979	-				+0.5
3,116,984	-				-0.8
3,116,987	+				+1.8
3,117,023	+				-2.4