Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02874

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
3,022,828	-		CCNA_02872	0.66	+1.4
3,022,867	-		CCNA_02872	0.69	+2.9
3,022,867	-				+2.9
3,022,920	-		CCNA_02872	0.74	+0.4
3,022,933	-		CCNA_02872	0.75	-0.1
3,022,949	+		CCNA_02872	0.76	+0.9
3,023,004	-		CCNA_02872	0.81	+0.4
3,023,055	-		CCNA_02872	0.85	+1.7
3,023,065	-		CCNA_02872	0.86	+0.6
3,023,065	-		CCNA_02872	0.86	-0.3
3,023,088	-		CCNA_02872	0.88	-0.2
3,023,121	-				+0.9
3,023,122	+				+0.4
3,023,178	-				-0.9
3,023,254	-				+1.4
3,023,261	-				-1.2
3,023,263	+				-0.8
3,023,268	-				+2.9
3,023,347	+				+2.9
3,023,442	+				-0.5
3,023,447	+				+0.1
3,023,451	+				+1.9
3,023,451	+				-0.1
3,023,473	+		CCNA_02873	0.10	+1.9
3,023,502	+		CCNA_02873	0.18	-0.6
3,023,505	-		CCNA_02873	0.19	-0.9
3,023,509	+		CCNA_02873	0.20	-0.1
3,023,509	+		CCNA_02873	0.20	-1.6
3,023,544	+		CCNA_02873	0.30	+1.9
3,023,544	+		CCNA_02873	0.30	+1.4
3,023,552	-		CCNA_02873	0.32	-0.8
3,023,574	-		CCNA_02873	0.38	+1.9
3,023,600	+				+1.9
3,023,617	+		CCNA_02873	0.50	+1.2
3,023,623	+		CCNA_02873	0.52	+1.9
3,023,638	+		CCNA_02873	0.56	+2.1
3,023,660	+		CCNA_02873	0.62	-0.1
3,023,660	+		CCNA_02873	0.62	+2.4
3,023,668	-		CCNA_02873	0.64	+0.4
3,023,688	+		CCNA_02873	0.69	+0.8
3,023,696	-		CCNA_02873	0.72	+0.9
3,023,716	+		CCNA_02873	0.77	+2.9
3,023,755	+		CCNA_02873	0.88	-0.4
3,023,771	+				-0.9
3,023,777	-				+0.9
3,023,839	+		CCNA_02874	0.16	+2.9
3,023,839	+		CCNA_02874	0.16	-0.4
3,023,846	+		CCNA_02874	0.18	+3.9
3,023,847	-		CCNA_02874	0.18	+0.3
3,023,847	-				+1.3
3,023,847	-		CCNA_02874	0.18	+2.9
3,023,847	-		CCNA_02874	0.18	+0.3
3,023,871	+		CCNA_02874	0.24	+0.9
3,023,872	+		CCNA_02874	0.24	-0.5
3,023,887	+		CCNA_02874	0.28	+0.9
3,023,887	+		CCNA_02874	0.28	-0.7
3,023,897	+		CCNA_02874	0.30	+1.1
3,023,932	+		CCNA_02874	0.38	-0.2
3,023,940	-		CCNA_02874	0.40	+0.6
3,023,957	-		CCNA_02874	0.44	+1.9
3,023,959	-		CCNA_02874	0.45	+1.3
3,023,963	-		CCNA_02874	0.46	+2.9
3,024,001	+		CCNA_02874	0.55	-0.5
3,024,096	-		CCNA_02874	0.78	+0.9
3,024,106	-		CCNA_02874	0.80	-1.5
3,024,142	+		CCNA_02874	0.89	+1.3
3,024,142	+		CCNA_02874	0.89	-0.9
3,024,147	+				+0.9
3,024,150	-				+0.1
3,024,171	+				+1.3
3,024,177	-				-1.3
3,024,217	+				-0.1
3,024,217	+				+1.9
3,024,225	-		CCNA_02875	0.12	-2.1
3,024,236	+		CCNA_02875	0.15	+0.8
3,024,259	+		CCNA_02875	0.20	-0.2
3,024,280	+		CCNA_02875	0.26	-1.8
3,024,335	+		CCNA_02875	0.39	+2.3
3,024,335	+		CCNA_02875	0.39	+2.8
3,024,335	+		CCNA_02875	0.39	+2.6
3,024,340	+		CCNA_02875	0.41	+0.3
3,024,342	+		CCNA_02875	0.41	+1.0
3,024,343	-		CCNA_02875	0.41	+0.9
3,024,381	-		CCNA_02875	0.51	-0.1
3,024,385	+		CCNA_02875	0.52	-0.2
3,024,401	-		CCNA_02875	0.56	-0.8
3,024,418	+		CCNA_02875	0.60	-1.5
3,024,435	+		CCNA_02875	0.64	-0.8
3,024,449	+		CCNA_02875	0.68	+0.3
3,024,532	-		CCNA_02875	0.89	+1.3
3,024,629	+				+0.9
3,024,655	+				-1.7
3,024,663	-				+0.1
3,024,666	-				-1.6
3,024,757	-		CCNA_02877	0.13	-1.1
3,024,762	-		CCNA_02877	0.13	+0.5
3,024,774	-		CCNA_02877	0.14	-0.2
3,024,780	-		CCNA_02877	0.14	-0.2
3,024,885	-		CCNA_02877	0.22	-1.7
3,024,915	+		CCNA_02877	0.25	-1.2
3,024,924	-		CCNA_02877	0.25	-1.8
3,024,930	+		CCNA_02877	0.26	+1.9
3,024,945	-		CCNA_02877	0.27	-1.7
3,024,965	-		CCNA_02877	0.28	+0.6
3,025,023	+		CCNA_02877	0.33	-0.0
3,025,028	+		CCNA_02877	0.33	+1.9
3,025,028	+		CCNA_02877	0.33	+0.9
3,025,028	+		CCNA_02877	0.33	+1.3
3,025,028	+		CCNA_02877	0.33	-0.7
3,025,028	+		CCNA_02877	0.33	-2.6
3,025,028	+		CCNA_02877	0.33	-0.5
3,025,028	+		CCNA_02877	0.33	+0.6
3,025,028	+		CCNA_02877	0.33	+0.6
3,025,028	+		CCNA_02877	0.33	+0.6
3,025,028	+				+1.9
3,025,028	+		CCNA_02877	0.33	+0.3
3,025,028	+		CCNA_02877	0.33	-1.7
3,025,028	+		CCNA_02877	0.33	-0.4
3,025,028	+		CCNA_02877	0.33	+0.9
3,025,028	+		CCNA_02877	0.33	-0.5
3,025,028	+		CCNA_02877	0.33	+0.2
3,025,028	+		CCNA_02877	0.33	+1.9
3,025,028	+		CCNA_02877	0.33	+1.3
3,025,028	+		CCNA_02877	0.33	+0.1
3,025,028	+		CCNA_02877	0.33	-1.4
3,025,031	-		CCNA_02877	0.33	-0.7
3,025,036	-		CCNA_02877	0.34	-0.7
3,025,036	-		CCNA_02877	0.34	+0.6
3,025,036	-		CCNA_02877	0.34	+1.3
3,025,036	-		CCNA_02877	0.34	-0.1
3,025,036	-		CCNA_02877	0.34	-0.4
3,025,036	-		CCNA_02877	0.34	+0.6
3,025,036	-		CCNA_02877	0.34	-0.4
3,025,036	-		CCNA_02877	0.34	-0.4
3,025,082	+		CCNA_02877	0.37	+0.1
3,025,117	+		CCNA_02877	0.40	+0.3
3,025,132	+		CCNA_02877	0.41	-1.1
3,025,140	-		CCNA_02877	0.41	-0.1