Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02712

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,869,871	-				+1.8
2,869,908	-		CCNA_02710	0.44	-1.4
2,869,915	-		CCNA_02710	0.46	+2.8
2,869,921	-		CCNA_02710	0.46	+0.5
2,869,945	-		CCNA_02710	0.50	-2.5
2,869,964	-		CCNA_02710	0.53	-1.3
2,869,965	+		CCNA_02710	0.53	+1.8
2,869,965	+		CCNA_02710	0.53	-1.4
2,869,969	+		CCNA_02710	0.54	-0.0
2,869,973	-		CCNA_02710	0.54	-1.1
2,869,973	-		CCNA_02710	0.54	-0.4
2,869,973	-		CCNA_02710	0.54	-0.5
2,869,991	+		CCNA_02710	0.57	+0.8
2,870,007	-		CCNA_02710	0.60	+1.8
2,870,062	-		CCNA_02710	0.68	-0.0
2,870,073	-		CCNA_02710	0.70	+0.5
2,870,090	+		CCNA_02710	0.72	-0.4
2,870,107	-		CCNA_02710	0.75	+1.6
2,870,112	-		CCNA_02710	0.75	-0.8
2,870,129	-		CCNA_02710	0.78	-0.1
2,870,129	-		CCNA_02710	0.78	-1.1
2,870,145	-		CCNA_02710	0.81	-0.8
2,870,151	-		CCNA_02710	0.81	-2.0
2,870,151	-		CCNA_02710	0.81	+0.2
2,870,151	-		CCNA_02710	0.81	-1.3
2,870,169	-		CCNA_02710	0.84	+1.2
2,870,169	-		CCNA_02710	0.84	-1.1
2,870,185	-		CCNA_02710	0.87	-0.3
2,870,219	-				-0.5
2,870,226	+				+0.5
2,870,275	+				+0.8
2,870,275	-				+2.1
2,870,280	+				+1.8
2,870,283	-				-0.9
2,870,288	-				-0.9
2,870,299	+				-0.8
2,870,338	+				-1.4
2,870,339	+				+0.9
2,870,345	+				+1.5
2,870,346	-				+1.2
2,870,346	-				+1.2
2,870,386	-				+0.2
2,870,424	-				-0.7
2,870,436	+				+0.9
2,870,458	-				-0.4
2,870,468	+		CCNA_02711	0.11	+0.6
2,870,488	-		CCNA_02711	0.16	-0.2
2,870,488	-		CCNA_02711	0.16	-0.0
2,870,529	+		CCNA_02711	0.25	-0.8
2,870,547	-		CCNA_02711	0.29	-0.8
2,870,614	+		CCNA_02711	0.44	-1.2
2,870,614	+		CCNA_02711	0.44	+0.4
2,870,622	-		CCNA_02711	0.46	+1.0
2,870,622	-		CCNA_02711	0.46	+0.2
2,870,624	+		CCNA_02711	0.46	-0.5
2,870,632	-		CCNA_02711	0.48	+0.8
2,870,632	-		CCNA_02711	0.48	+0.8
2,870,639	+		CCNA_02711	0.50	+2.0
2,870,639	+		CCNA_02711	0.50	+1.5
2,870,639	+		CCNA_02711	0.50	+1.1
2,870,639	+		CCNA_02711	0.50	+0.5
2,870,639	+		CCNA_02711	0.50	+0.7
2,870,639	+		CCNA_02711	0.50	+1.5
2,870,639	+		CCNA_02711	0.50	+3.2
2,870,647	-		CCNA_02711	0.51	+0.5
2,870,647	-		CCNA_02711	0.51	-1.1
2,870,647	-		CCNA_02711	0.51	+1.8
2,870,647	-		CCNA_02711	0.51	+0.2
2,870,652	-		CCNA_02711	0.52	-0.5
2,870,672	+		CCNA_02711	0.57	+1.5
2,870,680	-		CCNA_02711	0.59	-0.0
2,870,681	+		CCNA_02711	0.59	-0.7
2,870,710	-		CCNA_02711	0.66	-0.4
2,870,754	+		CCNA_02711	0.75	+0.8
2,870,764	-		CCNA_02711	0.78	-0.9
2,870,766	+		CCNA_02711	0.78	-1.5
2,870,766	+		CCNA_02711	0.78	+0.7
2,870,766	+		CCNA_02711	0.78	-1.0
2,870,769	-		CCNA_02711	0.79	+2.8
2,870,775	-		CCNA_02711	0.80	-1.1
2,870,780	-		CCNA_02711	0.81	+0.2
2,870,810	-		CCNA_02711	0.88	+0.8
2,870,818	-				-0.9
2,870,864	+				+1.8
2,870,883	+				+1.5
2,870,883	+				+0.8
2,870,883	+				-0.5
2,870,883	+				+2.0
2,870,883	+				+1.5
2,870,883	+				+2.2
2,870,885	-				+0.8
2,870,891	-				-0.9
2,870,891	-				-1.2
2,870,891	-				+1.8
2,870,907	+				+0.4
2,870,917	-				+1.8
2,870,944	-				+1.8
2,870,947	-				+1.1
2,870,951	+				-0.6
2,870,956	+				+1.7
2,870,966	+		CCNA_02712	0.11	+0.0
2,870,971	+		CCNA_02712	0.11	+3.1
2,871,002	+		CCNA_02712	0.14	+0.8
2,871,008	-		CCNA_02712	0.15	+2.8
2,871,017	+		CCNA_02712	0.16	+0.4
2,871,025	-		CCNA_02712	0.16	+1.8
2,871,055	-		CCNA_02712	0.19	+0.8
2,871,057	+		CCNA_02712	0.20	+0.2
2,871,105	-		CCNA_02712	0.24	-0.7
2,871,145	-		CCNA_02712	0.28	+0.8
2,871,156	+		CCNA_02712	0.29	-0.4
2,871,163	-		CCNA_02712	0.30	+0.2
2,871,188	+		CCNA_02712	0.32	+3.6
2,871,195	+		CCNA_02712	0.33	+0.8
2,871,196	-		CCNA_02712	0.33	-0.9
2,871,196	-		CCNA_02712	0.33	+0.8
2,871,230	-		CCNA_02712	0.37	+1.2
2,871,258	+		CCNA_02712	0.39	-1.5
2,871,260	+		CCNA_02712	0.40	+1.2
2,871,260	+		CCNA_02712	0.40	+1.4
2,871,260	+		CCNA_02712	0.40	+2.5
2,871,260	+		CCNA_02712	0.40	+0.8
2,871,260	+		CCNA_02712	0.40	+2.3
2,871,267	-		CCNA_02712	0.40	+2.8
2,871,268	-		CCNA_02712	0.40	+0.5
2,871,268	-		CCNA_02712	0.40	-2.4
2,871,299	+		CCNA_02712	0.43	+1.0
2,871,314	+		CCNA_02712	0.45	+1.1
2,871,359	+		CCNA_02712	0.49	+1.1
2,871,359	+		CCNA_02712	0.49	-0.3
2,871,376	-		CCNA_02712	0.51	+0.2
2,871,384	+		CCNA_02712	0.52	+4.4
2,871,394	+		CCNA_02712	0.53	+3.2
2,871,485	+		CCNA_02712	0.62	+1.7
2,871,485	+		CCNA_02712	0.62	+0.2
2,871,493	+		CCNA_02712	0.63	+1.0
2,871,501	-		CCNA_02712	0.63	+1.2
2,871,582	+		CCNA_02712	0.71	-0.7
2,871,677	+		CCNA_02712	0.81	+0.8
2,871,686	-		CCNA_02712	0.82	+1.2
2,871,712	+		CCNA_02712	0.84	-0.7
2,871,736	+		CCNA_02712	0.86	+1.7
2,871,748	-		CCNA_02712	0.88	+2.8
2,871,762	-		CCNA_02712	0.89	+0.5
2,871,773	-				-0.0
2,871,773	-				-0.7
2,871,792	+				+2.2
2,871,798	-				+0.5
2,871,800	-				-0.0
2,871,802	+				+1.1
2,871,802	+				+1.8
2,871,805	-				-0.0
2,871,871	+				-0.3
2,871,903	-				+0.2
2,871,956	-		CCNA_02713	0.13	+1.2
2,871,958	+		CCNA_02713	0.13	+4.0
2,871,966	-		CCNA_02713	0.14	-2.4
2,871,993	+		CCNA_02713	0.16	-0.4
2,871,993	+		CCNA_02713	0.16	+1.0
2,871,993	+		CCNA_02713	0.16	+2.1
2,871,993	+		CCNA_02713	0.16	+1.9
2,872,001	-		CCNA_02713	0.17	+1.8
2,872,041	-		CCNA_02713	0.20	-0.7
2,872,045	+		CCNA_02713	0.20	+1.8
2,872,073	+		CCNA_02713	0.23	-0.6
2,872,073	-		CCNA_02713	0.23	-0.2
2,872,081	-		CCNA_02713	0.23	-1.6
2,872,100	+		CCNA_02713	0.25	+1.3
2,872,120	+		CCNA_02713	0.26	+1.5
2,872,143	-		CCNA_02713	0.28	-0.0
2,872,174	+		CCNA_02713	0.31	+1.0
2,872,174	+		CCNA_02713	0.31	+1.2
2,872,182	-		CCNA_02713	0.31	+1.2
2,872,182	-		CCNA_02713	0.31	-0.5
2,872,189	+		CCNA_02713	0.32	+1.0
2,872,192	-		CCNA_02713	0.32	-0.2
2,872,197	-		CCNA_02713	0.33	+0.5
2,872,227	+		CCNA_02713	0.35	+0.9
2,872,227	+		CCNA_02713	0.35	+1.9
2,872,227	+		CCNA_02713	0.35	+1.2
2,872,263	+		CCNA_02713	0.38	+1.2
2,872,272	-		CCNA_02713	0.39	-0.0
2,872,272	-		CCNA_02713	0.39	+2.8
2,872,272	-		CCNA_02713	0.39	-0.0
2,872,278	-		CCNA_02713	0.39	+0.1
2,872,289	+		CCNA_02713	0.40	+3.1
2,872,289	-		CCNA_02713	0.40	+0.8
2,872,300	+		CCNA_02713	0.41	+2.2
2,872,301	+		CCNA_02713	0.41	+1.9
2,872,308	-		CCNA_02713	0.42	-1.4
2,872,312	+		CCNA_02713	0.42	+3.5
2,872,349	+		CCNA_02713	0.45	-1.0
2,872,356	-		CCNA_02713	0.45	-1.7
2,872,398	-		CCNA_02713	0.49	+0.2
2,872,445	+		CCNA_02713	0.52	-0.4
2,872,477	+		CCNA_02713	0.55	-0.2
2,872,482	+		CCNA_02713	0.55	+0.3
2,872,482	+		CCNA_02713	0.55	+1.0
2,872,482	+		CCNA_02713	0.55	+0.7
2,872,482	+		CCNA_02713	0.55	-0.2
2,872,485	-		CCNA_02713	0.56	-0.6
2,872,490	-		CCNA_02713	0.56	-0.5
2,872,490	-		CCNA_02713	0.56	-1.1
2,872,490	-		CCNA_02713	0.56	-0.4
2,872,490	-		CCNA_02713	0.56	+0.3
2,872,490	-		CCNA_02713	0.56	-0.0
2,872,490	-		CCNA_02713	0.56	-1.9
2,872,490	-		CCNA_02713	0.56	+0.5
2,872,536	+		CCNA_02713	0.60	+0.4
2,872,542	-		CCNA_02713	0.60	-0.0
2,872,544	-		CCNA_02713	0.60	+2.8
2,872,574	+		CCNA_02713	0.63	-0.5
2,872,623	+		CCNA_02713	0.67	-1.7
2,872,623	+		CCNA_02713	0.67	-1.0
2,872,631	+		CCNA_02713	0.67	+0.8
2,872,631	+		CCNA_02713	0.67	-0.0
2,872,631	+		CCNA_02713	0.67	+1.4
2,872,631	+		CCNA_02713	0.67	-1.7
2,872,639	-		CCNA_02713	0.68	-0.5
2,872,639	-		CCNA_02713	0.68	+0.1
2,872,639	-		CCNA_02713	0.68	+0.6
2,872,639	-		CCNA_02713	0.68	+0.8
2,872,658	-		CCNA_02713	0.70	-1.2
2,872,659	-		CCNA_02713	0.70	+0.5
2,872,661	+		CCNA_02713	0.70	-0.2
2,872,664	-		CCNA_02713	0.70	-0.7
2,872,671	+		CCNA_02713	0.71	+0.2
2,872,679	-		CCNA_02713	0.71	-0.0
2,872,679	-		CCNA_02713	0.71	+1.8
2,872,681	+		CCNA_02713	0.71	-1.4
2,872,681	+		CCNA_02713	0.71	-0.5
2,872,681	+		CCNA_02713	0.71	+1.5
2,872,681	+		CCNA_02713	0.71	-2.2
2,872,689	-		CCNA_02713	0.72	+0.2
2,872,689	-		CCNA_02713	0.72	-1.1
2,872,689	-		CCNA_02713	0.72	-1.0
2,872,700	-		CCNA_02713	0.73	+0.5
2,872,700	-		CCNA_02713	0.73	+0.2
2,872,727	-		CCNA_02713	0.75	-1.3
2,872,727	-		CCNA_02713	0.75	-0.5
2,872,727	-		CCNA_02713	0.75	+3.4
2,872,751	+		CCNA_02713	0.77	-0.8
2,872,761	+		CCNA_02713	0.78	+4.0
2,872,769	-		CCNA_02713	0.78	+1.3
2,872,788	-		CCNA_02713	0.80	-0.4
2,872,813	+		CCNA_02713	0.82	+0.2
2,872,869	-		CCNA_02713	0.86	+2.8