Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02607

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,752,931	+		CCNA_02606	0.67	+1.2
2,752,936	-				+2.2
2,752,939	-		CCNA_02606	0.67	+1.2
2,752,949	+		CCNA_02606	0.68	-0.5
2,752,954	+		CCNA_02606	0.68	-0.4
2,752,961	-		CCNA_02606	0.68	-1.3
2,752,966	+		CCNA_02606	0.68	-0.8
2,752,966	+		CCNA_02606	0.68	+0.5
2,752,966	+		CCNA_02606	0.68	-1.0
2,752,971	+		CCNA_02606	0.68	+0.5
2,752,974	-		CCNA_02606	0.69	+0.8
2,753,023	-		CCNA_02606	0.71	+0.8
2,753,030	+		CCNA_02606	0.71	-0.9
2,753,030	+		CCNA_02606	0.71	+0.2
2,753,038	-		CCNA_02606	0.71	+0.8
2,753,038	-		CCNA_02606	0.71	-0.4
2,753,059	-		CCNA_02606	0.72	-0.9
2,753,061	+		CCNA_02606	0.72	+0.5
2,753,072	+		CCNA_02606	0.72	+1.2
2,753,093	+		CCNA_02606	0.73	+1.6
2,753,094	+		CCNA_02606	0.73	+0.8
2,753,102	-		CCNA_02606	0.74	-0.2
2,753,119	+		CCNA_02606	0.74	+1.8
2,753,122	-		CCNA_02606	0.74	+3.4
2,753,127	-		CCNA_02606	0.75	+0.8
2,753,180	+		CCNA_02606	0.77	-0.5
2,753,180	+		CCNA_02606	0.77	-0.7
2,753,198	-		CCNA_02606	0.77	+2.6
2,753,199	+		CCNA_02606	0.78	-0.9
2,753,215	+		CCNA_02606	0.78	+0.2
2,753,246	-		CCNA_02606	0.79	-1.0
2,753,246	-		CCNA_02606	0.79	-0.0
2,753,283	+		CCNA_02606	0.81	+0.5
2,753,284	+		CCNA_02606	0.81	+0.8
2,753,335	-		CCNA_02606	0.83	-0.5
2,753,339	+		CCNA_02606	0.83	-0.4
2,753,339	+		CCNA_02606	0.83	-1.2
2,753,339	+		CCNA_02606	0.83	-2.1
2,753,340	+		CCNA_02606	0.83	-0.5
2,753,344	+		CCNA_02606	0.83	+0.5
2,753,347	-		CCNA_02606	0.83	+0.8
2,753,347	-		CCNA_02606	0.83	-0.4
2,753,347	-		CCNA_02606	0.83	-0.5
2,753,348	-		CCNA_02606	0.83	-0.4
2,753,373	+		CCNA_02606	0.84	+0.8
2,753,404	+		CCNA_02606	0.86	-0.5
2,753,451	-		CCNA_02606	0.88	+1.5
2,753,465	+		CCNA_02606	0.88	-1.8
2,753,465	+		CCNA_02606	0.88	+0.3
2,753,473	-		CCNA_02606	0.88	+1.2
2,753,506	+		CCNA_02606	0.90	+0.2
2,753,532	+				+1.2
2,753,534	+				+1.8
2,753,534	+				-1.1
2,753,534	+				-0.7
2,753,535	-				-0.0
2,753,539	+				-0.0
2,753,539	+				-0.7
2,753,539	+				+1.8
2,753,539	+				+0.5
2,753,539	+				-0.0
2,753,539	+				-0.7
2,753,542	-				+1.2
2,753,542	-				-0.4
2,753,542	-				-0.0
2,753,542	-				+0.8
2,753,542	-				+2.8
2,753,542	-				-0.2
2,753,547	-				-0.2
2,753,547	-				+1.2
2,753,547	-				-0.2
2,753,547	-				-0.2
2,753,547	-				+0.8
2,753,610	+				-0.4
2,753,610	+				+2.8
2,753,637	+				-0.0
2,753,637	+				+0.8
2,753,719	+				-0.4
2,753,719	-				+1.2
2,753,724	+				+1.2
2,753,724	+				+1.8
2,753,732	-				-0.7
2,753,737	+				+0.6
2,753,737	-				-0.2
2,753,747	+				-0.0
2,753,747	+				+0.2
2,753,754	-				+0.3
2,753,755	-				+1.8
2,753,755	-				-0.3
2,753,755	-				-0.7
2,753,755	-				-0.3
2,753,807	-				-0.2
2,755,121	+				+4.0
2,755,128	+				+4.2
2,755,128	+				+3.9
2,755,136	+				+3.7
2,755,136	+				+3.7
2,755,214	+				+2.6
2,755,214	+				-2.1
2,755,245	+				+0.8
2,755,250	+				-0.5
2,755,253	-				+0.4
2,755,258	-				-0.3
2,755,287	+				-0.0
2,755,293	-				+0.1
2,755,308	+				+0.7
2,755,402	+		CCNA_02608	0.20	+0.2
2,755,402	+		CCNA_02608	0.20	+1.0
2,755,402	+		CCNA_02608	0.20	+2.8
2,755,438	+		CCNA_02608	0.26	+2.2
2,755,438	+		CCNA_02608	0.26	+1.3
2,755,446	-		CCNA_02608	0.27	+0.3
2,755,474	+		CCNA_02608	0.32	-0.0
2,755,573	+		CCNA_02608	0.49	+0.1
2,755,575	-		CCNA_02608	0.49	-0.7
2,755,621	-		CCNA_02608	0.57	+1.1
2,755,626	+		CCNA_02608	0.58	+0.8
2,755,646	-		CCNA_02608	0.62	-1.3
2,755,679	+		CCNA_02608	0.67	+1.2
2,755,679	+		CCNA_02608	0.67	+1.0
2,755,693	-		CCNA_02608	0.70	-2.0
2,755,694	+		CCNA_02608	0.70	+0.8
2,755,780	+		CCNA_02608	0.85	+0.2
2,755,787	+		CCNA_02608	0.86	+0.5
2,755,787	+		CCNA_02608	0.86	+0.0
2,755,821	-				+0.8
2,755,885	+				+1.5
2,755,949	-				-0.1
2,755,949	-				-0.5
2,755,986	-		CCNA_02609	0.12	+0.8
2,755,992	+		CCNA_02609	0.12	-1.5
2,756,012	+		CCNA_02609	0.14	+0.2
2,756,030	-		CCNA_02609	0.16	+1.2
2,756,043	+		CCNA_02609	0.18	+2.8
2,756,048	+		CCNA_02609	0.18	+1.1
2,756,059	+		CCNA_02609	0.19	+0.6
2,756,083	-		CCNA_02609	0.22	-0.9