Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02367

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,508,313	+		CCNA_02366	0.50	-0.6
2,508,334	-		CCNA_02366	0.52	+1.0
2,508,356	+		CCNA_02366	0.53	+1.6
2,508,384	+		CCNA_02366	0.55	-1.8
2,508,392	-		CCNA_02366	0.55	-0.2
2,508,439	-		CCNA_02366	0.59	+0.3
2,508,441	+		CCNA_02366	0.59	+0.3
2,508,441	+		CCNA_02366	0.59	-1.0
2,508,453	+		CCNA_02366	0.59	+1.6
2,508,463	+		CCNA_02366	0.60	+0.0
2,508,463	+				+0.6
2,508,463	+		CCNA_02366	0.60	+0.3
2,508,463	+		CCNA_02366	0.60	+0.3
2,508,471	-		CCNA_02366	0.61	+0.6
2,508,471	-		CCNA_02366	0.61	+0.0
2,508,473	+		CCNA_02366	0.61	-1.9
2,508,481	-		CCNA_02366	0.61	-0.4
2,508,481	-		CCNA_02366	0.61	-0.4
2,508,481	-		CCNA_02366	0.61	-0.2
2,508,490	+		CCNA_02366	0.62	-0.6
2,508,493	-		CCNA_02366	0.62	-1.2
2,508,519	-		CCNA_02366	0.64	+2.6
2,508,532	+		CCNA_02366	0.65	-2.2
2,508,532	+		CCNA_02366	0.65	-0.6
2,508,557	+		CCNA_02366	0.66	+2.6
2,508,557	+		CCNA_02366	0.66	-0.8
2,508,557	+		CCNA_02366	0.66	+1.6
2,508,565	-		CCNA_02366	0.67	+0.9
2,508,565	-		CCNA_02366	0.67	-1.2
2,508,565	-		CCNA_02366	0.67	-1.5
2,508,587	+		CCNA_02366	0.68	-0.7
2,508,605	-		CCNA_02366	0.70	-0.5
2,508,621	+		CCNA_02366	0.71	+0.0
2,508,642	-		CCNA_02366	0.72	+0.4
2,508,656	-		CCNA_02366	0.73	+0.6
2,508,760	-		CCNA_02366	0.80	+0.0
2,508,790	+		CCNA_02366	0.82	+0.6
2,508,846	+		CCNA_02366	0.85	-0.2
2,508,879	-		CCNA_02366	0.88	-1.6
2,508,942	-				-1.1
2,508,947	-				+0.7
2,508,955	+				-2.0
2,508,982	+				+1.0
2,508,995	-				-1.1
2,509,028	+				+1.0
2,509,078	+				-1.0
2,509,086	-				+0.8
2,509,097	-				+1.6
2,509,303	+				+0.0
2,509,334	+				+1.2
2,509,382	+				+0.3
2,509,392	+				-1.1
2,509,420	-				-0.9
2,509,463	+		CCNA_02367	0.14	+3.1
2,509,465	+		CCNA_02367	0.14	+2.8
2,509,607	+		CCNA_02367	0.27	+2.9
2,509,631	-		CCNA_02367	0.29	+1.0
2,509,643	+		CCNA_02367	0.30	+4.3
2,509,712	-		CCNA_02367	0.37	-0.9
2,509,727	+		CCNA_02367	0.38	+2.0
2,509,732	-		CCNA_02367	0.39	+3.3
2,509,732	-		CCNA_02367	0.39	-0.0
2,509,737	+		CCNA_02367	0.39	+3.2
2,509,737	+		CCNA_02367	0.39	+3.1
2,509,761	+		CCNA_02367	0.41	+2.9
2,509,806	+		CCNA_02367	0.45	+2.9
2,509,814	-		CCNA_02367	0.46	-1.0
2,509,818	+		CCNA_02367	0.46	+2.8
2,509,842	+		CCNA_02367	0.49	+3.1
2,509,850	-		CCNA_02367	0.49	-1.6
2,509,872	+		CCNA_02367	0.51	+1.8
2,509,872	-		CCNA_02367	0.51	+1.2
2,509,872	-		CCNA_02367	0.51	+2.9
2,509,960	-		CCNA_02367	0.60	+0.6
2,509,967	+		CCNA_02367	0.60	+2.5
2,509,967	+		CCNA_02367	0.60	+2.0
2,509,967	+		CCNA_02367	0.60	+1.9
2,509,975	-		CCNA_02367	0.61	+2.3
2,510,007	+		CCNA_02367	0.64	+2.8
2,510,014	+		CCNA_02367	0.64	+2.9
2,510,015	+		CCNA_02367	0.65	+3.8
2,510,024	+		CCNA_02367	0.65	+3.3
2,510,050	-		CCNA_02367	0.68	+0.7
2,510,067	+		CCNA_02367	0.69	+2.5
2,510,075	-		CCNA_02367	0.70	+2.6
2,510,095	+		CCNA_02367	0.72	+2.9
2,510,130	-		CCNA_02367	0.75	+1.9
2,510,144	+		CCNA_02367	0.76	+2.7
2,510,152	-		CCNA_02367	0.77	+2.3
2,510,152	-		CCNA_02367	0.77	+3.0
2,510,200	+		CCNA_02367	0.82	+3.3
2,510,206	+		CCNA_02367	0.82	+3.0
2,510,219	-		CCNA_02367	0.83	+2.5
2,510,224	+		CCNA_02367	0.84	+2.6
2,510,236	+		CCNA_02367	0.85	+2.7
2,510,266	-		CCNA_02367	0.88	+3.3
2,510,268	+		CCNA_02367	0.88	+2.6
2,510,278	+		CCNA_02367	0.89	+4.9
2,510,283	+		CCNA_02367	0.89	+2.8
2,510,286	-		CCNA_02367	0.89	+3.4
2,510,325	+				+2.4
2,510,349	+				+1.3
2,510,368	+				+2.4
2,510,395	+				+1.6
2,510,395	+				-1.5
2,510,395	+				-1.0
2,510,403	-				-1.1
2,510,403	-				+1.0
2,510,417	+				+0.6
2,510,417	+				+0.6
2,510,453	+				-0.7
2,510,499	-				+2.1
2,510,509	-				+1.9
2,510,526	+				-1.2
2,510,551	-				+3.0
2,510,570	-		CCNA_02368	0.11	+2.5
2,510,620	-		CCNA_02368	0.14	+2.3
2,510,620	-		CCNA_02368	0.14	+1.0
2,510,620	-		CCNA_02368	0.14	+1.5
2,510,636	-		CCNA_02368	0.15	+2.1
2,510,641	-		CCNA_02368	0.15	+2.5
2,510,663	-		CCNA_02368	0.16	+1.9
2,510,675	-		CCNA_02368	0.17	+3.0
2,510,680	-		CCNA_02368	0.17	+2.1
2,510,681	+		CCNA_02368	0.17	+1.0
2,510,733	+		CCNA_02368	0.20	+0.6
2,510,837	-		CCNA_02368	0.27	+1.4
2,510,837	-		CCNA_02368	0.27	+3.4
2,510,838	-		CCNA_02368	0.27	+2.5
2,510,849	-		CCNA_02368	0.27	+3.7
2,510,865	+		CCNA_02368	0.28	+1.0
2,510,865	+		CCNA_02368	0.28	+0.6
2,510,873	-		CCNA_02368	0.29	+2.4
2,510,873	-		CCNA_02368	0.29	+3.0
2,510,874	-		CCNA_02368	0.29	+3.2
2,510,877	+				+1.6
2,510,885	-		CCNA_02368	0.30	+3.0
2,510,885	-		CCNA_02368	0.30	+2.7
2,510,920	+		CCNA_02368	0.32	+2.6
2,510,977	-		CCNA_02368	0.35	+2.6
2,510,977	-		CCNA_02368	0.35	+3.6
2,510,979	+		CCNA_02368	0.35	+0.3
2,511,023	-		CCNA_02368	0.38	+3.2
2,511,024	-		CCNA_02368	0.38	+2.5
2,511,024	-		CCNA_02368	0.38	+2.9
2,511,122	-		CCNA_02368	0.44	+3.0
2,511,134	-		CCNA_02368	0.45	+1.9
2,511,134	-		CCNA_02368	0.45	+2.6
2,511,163	-		CCNA_02368	0.47	+1.7
2,511,163	-		CCNA_02368	0.47	+2.3
2,511,189	-		CCNA_02368	0.48	-2.0
2,511,347	+		CCNA_02368	0.58	+0.6
2,511,347	+		CCNA_02368	0.58	+0.3
2,511,352	+		CCNA_02368	0.58	+3.8
2,511,355	-		CCNA_02368	0.58	+0.3
2,511,355	-		CCNA_02368	0.58	+1.8
2,511,355	-		CCNA_02368	0.58	-0.1
2,511,355	-		CCNA_02368	0.58	-0.3
2,511,355	-		CCNA_02368	0.58	-0.2
2,511,355	-		CCNA_02368	0.58	+0.6
2,511,355	-		CCNA_02368	0.58	+1.8
2,511,362	-		CCNA_02368	0.59	+1.8
2,511,362	-		CCNA_02368	0.59	+3.5
2,511,393	+		CCNA_02368	0.61	-0.8