Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02336

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,475,810	+		CCNA_02334	0.68	+1.0
2,475,834	+		CCNA_02334	0.74	+0.7
2,475,839	+		CCNA_02334	0.76	-0.6
2,475,839	+		CCNA_02334	0.76	+1.9
2,475,847	+		CCNA_02334	0.78	-0.7
2,475,887	+		CCNA_02334	0.88	+0.2
2,475,893	+		CCNA_02334	0.89	+1.8
2,475,962	+				+1.0
2,475,982	+				-0.0
2,475,982	+				-1.9
2,475,990	-				+0.5
2,475,990	-				-1.4
2,475,990	-				+0.2
2,476,054	-				+0.1
2,476,084	+		CCNA_02335	0.10	+1.0
2,476,094	+		CCNA_02335	0.11	+1.2
2,476,094	+		CCNA_02335	0.11	+2.9
2,476,108	+		CCNA_02335	0.13	+1.4
2,476,121	+		CCNA_02335	0.15	+0.6
2,476,255	-		CCNA_02335	0.31	-0.7
2,476,257	-		CCNA_02335	0.31	-0.1
2,476,282	-		CCNA_02335	0.34	+2.5
2,476,333	+		CCNA_02335	0.40	+1.6
2,476,361	-		CCNA_02335	0.43	-1.0
2,476,396	+		CCNA_02335	0.48	+0.5
2,476,434	-		CCNA_02335	0.52	+0.1
2,476,600	-		CCNA_02335	0.72	-2.3
2,476,613	+		CCNA_02335	0.73	+0.1
2,476,802	+				-0.9
2,476,810	-				-0.7
2,476,815	-				+0.1
2,476,820	-				-1.4
2,476,887	-				+2.8
2,476,887	-				-1.9
2,476,887	-				-1.2
2,476,930	+		CCNA_02336	0.12	-0.2
2,476,938	-		CCNA_02336	0.13	-1.3
2,476,946	-		CCNA_02336	0.14	-0.4
2,477,106	+		CCNA_02336	0.30	+0.1
2,477,113	+		CCNA_02336	0.31	-1.3
2,477,217	-		CCNA_02336	0.42	-1.2
2,477,258	-		CCNA_02336	0.46	+0.1
2,477,378	+		CCNA_02336	0.58	+0.5
2,477,379	+		CCNA_02336	0.58	-1.7
2,477,379	+		CCNA_02336	0.58	-2.1
2,477,429	+		CCNA_02336	0.63	-0.3
2,477,435	-		CCNA_02336	0.64	+1.9
2,477,437	-		CCNA_02336	0.64	+0.4
2,477,465	-		CCNA_02336	0.67	+1.9
2,477,506	+		CCNA_02336	0.71	+1.8
2,477,515	-		CCNA_02336	0.72	+0.3
2,477,540	+		CCNA_02336	0.75	+0.2
2,477,541	+		CCNA_02336	0.75	-1.4
2,477,541	+		CCNA_02336	0.75	+0.9
2,477,549	-		CCNA_02336	0.75	-0.3
2,477,551	+		CCNA_02336	0.76	-0.8
2,477,633	+		CCNA_02336	0.84	-0.2
2,477,640	+		CCNA_02336	0.85	-1.8
2,477,646	-		CCNA_02336	0.85	+1.2
2,477,648	+		CCNA_02336	0.86	+0.1
2,477,658	-		CCNA_02336	0.87	+2.7
2,477,658	-		CCNA_02336	0.87	-0.2
2,477,662	-		CCNA_02336	0.87	-0.2
2,477,697	-				+1.0
2,477,704	-				+2.2
2,477,774	-				+3.8
2,478,129	-				+1.9
2,478,171	+				+0.2
2,478,223	-				+1.6
2,478,223	-				+3.7
2,478,223	-				+2.2
2,478,237	+				-0.3
2,478,244	-				+2.4
2,478,245	-				+1.7
2,478,264	+		CCNA_02338	0.11	-0.1
2,478,269	+		CCNA_02338	0.12	-2.2
2,478,272	-		CCNA_02338	0.12	+1.3
2,478,272	-		CCNA_02338	0.12	+2.4
2,478,277	-		CCNA_02338	0.13	+2.5
2,478,277	-		CCNA_02338	0.13	+3.3
2,478,277	-		CCNA_02338	0.13	+2.5
2,478,277	-		CCNA_02338	0.13	+2.6
2,478,279	-		CCNA_02338	0.13	+1.8
2,478,323	+		CCNA_02338	0.20	-1.3
2,478,370	-		CCNA_02338	0.27	+3.0
2,478,393	+		CCNA_02338	0.30	-2.7
2,478,447	-		CCNA_02338	0.38	+2.0
2,478,447	-		CCNA_02338	0.38	+1.3
2,478,466	-		CCNA_02338	0.41	+2.2
2,478,466	-		CCNA_02338	0.41	+2.2
2,478,474	-		CCNA_02338	0.42	+2.5
2,478,495	+		CCNA_02338	0.45	-0.1
2,478,525	-		CCNA_02338	0.49	+1.4
2,478,550	-		CCNA_02338	0.53	+1.7
2,478,550	-		CCNA_02338	0.53	+0.9
2,478,550	-		CCNA_02338	0.53	+2.3
2,478,550	-		CCNA_02338	0.53	+1.7
2,478,562	-		CCNA_02338	0.55	+2.8
2,478,587	-		CCNA_02338	0.59	+1.6
2,478,591	+		CCNA_02338	0.59	+0.9
2,478,648	+		CCNA_02338	0.68	-0.5
2,478,684	+		CCNA_02338	0.73	+0.5
2,478,687	-		CCNA_02338	0.73	+1.0
2,478,712	+		CCNA_02338	0.77	-0.8
2,478,712	+		CCNA_02338	0.77	-1.8
2,478,720	-		CCNA_02338	0.78	+1.5
2,478,720	-		CCNA_02338	0.78	+2.6
2,478,720	-		CCNA_02338	0.78	+2.7
2,478,738	+		CCNA_02338	0.81	+0.2
2,478,781	-		CCNA_02338	0.87	+2.4