Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02289

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,436,377	+				+0.1
2,436,397	+				-0.1
2,436,404	-				+0.1
2,436,405	-				-1.3
2,436,414	+				-0.6
2,436,441	+				-0.3
2,436,444	-				-0.6
2,436,446	+				-1.9
2,436,456	+				+2.6
2,436,472	+		CCNA_02288	0.11	+0.1
2,436,508	+		CCNA_02288	0.15	+0.8
2,436,565	-		CCNA_02288	0.22	-0.3
2,436,572	+		CCNA_02288	0.23	-0.2
2,436,577	+		CCNA_02288	0.23	+0.1
2,436,580	-		CCNA_02288	0.24	-1.2
2,436,580	-		CCNA_02288	0.24	-1.2
2,436,613	-		CCNA_02288	0.28	-0.6
2,436,730	-		CCNA_02288	0.42	-0.4
2,436,746	-		CCNA_02288	0.44	-0.5
2,436,805	+		CCNA_02288	0.51	-0.7
2,436,828	+		CCNA_02288	0.53	+0.4
2,436,837	+		CCNA_02288	0.54	-1.4
2,436,838	-		CCNA_02288	0.55	-2.3
2,436,845	-		CCNA_02288	0.55	-0.4
2,436,875	-		CCNA_02288	0.59	-0.7
2,436,876	+		CCNA_02288	0.59	-0.9
2,436,893	+		CCNA_02288	0.61	-1.2
2,436,893	+		CCNA_02288	0.61	-1.5
2,436,901	-		CCNA_02288	0.62	-2.1
2,436,901	-		CCNA_02288	0.62	-0.2
2,436,901	-		CCNA_02288	0.62	-1.2
2,436,902	-		CCNA_02288	0.62	-1.3
2,436,929	-		CCNA_02288	0.65	-0.7
2,436,929	-		CCNA_02288	0.65	-0.9
2,436,934	-		CCNA_02288	0.66	+0.4
2,436,971	+		CCNA_02288	0.70	-0.2
2,436,993	+		CCNA_02288	0.73	+0.1
2,436,996	-		CCNA_02288	0.73	-1.2
2,437,000	-		CCNA_02288	0.74	-1.0
2,437,002	+		CCNA_02288	0.74	-0.4
2,437,006	+		CCNA_02288	0.75	+3.4
2,437,007	+		CCNA_02288	0.75	+0.4
2,437,024	+		CCNA_02288	0.77	+1.4
2,437,066	-		CCNA_02288	0.82	-1.7
2,437,129	+		CCNA_02288	0.89	+0.4
2,437,131	-		CCNA_02288	0.89	-3.1
2,437,144	+				+3.4
2,437,144	+				-0.5
2,437,144	+				-0.6
2,437,152	-				-1.5
2,437,214	+				-2.3
2,437,243	+				+0.8
2,437,249	-				-0.4
2,437,280	-				-0.1
2,437,282	+				-1.0
2,437,282	+				-1.5
2,437,282	+				-2.2
2,437,290	-				-1.3
2,437,290	-				-0.8
2,437,290	-				-1.8
2,437,290	-				-1.7
2,437,303	+				-1.9
2,437,306	-				+1.1
2,437,310	-				-1.4
2,437,367	-				-1.0
2,437,377	-				+1.2
2,437,404	+		CCNA_02289	0.12	+1.4
2,437,464	-		CCNA_02289	0.31	+4.3
2,437,482	-		CCNA_02289	0.37	+3.7
2,437,488	-		CCNA_02289	0.39	+4.4
2,437,488	-		CCNA_02289	0.39	+3.9
2,437,517	-		CCNA_02289	0.48	+3.8
2,437,543	-		CCNA_02289	0.57	+3.9
2,437,595	-		CCNA_02289	0.73	+4.1
2,437,595	-		CCNA_02289	0.73	+4.3
2,437,600	-		CCNA_02289	0.75	+3.9
2,437,605	-		CCNA_02289	0.77	+4.0
2,437,605	-		CCNA_02289	0.77	+3.8
2,437,605	-		CCNA_02289	0.77	+3.6
2,437,613	+		CCNA_02289	0.79	+3.4
2,437,672	-				+2.2
2,437,691	-				+4.2
2,437,751	+		CCNA_02290	0.10	+0.1
2,437,751	+		CCNA_02290	0.10	+0.8
2,437,759	-		CCNA_02290	0.11	+2.2
2,437,830	-		CCNA_02290	0.22	+0.6
2,437,873	-		CCNA_02290	0.29	-0.3
2,437,873	-		CCNA_02290	0.29	+1.8
2,437,873	-		CCNA_02290	0.29	+0.4
2,437,878	+		CCNA_02290	0.30	-1.6
2,437,899	+		CCNA_02290	0.33	-0.4
2,437,901	-		CCNA_02290	0.33	+1.4
2,438,120	-		CCNA_02290	0.67	+1.6
2,438,143	-		CCNA_02290	0.71	+1.0
2,438,188	+		CCNA_02290	0.77	+0.4
2,438,188	+		CCNA_02290	0.77	+0.4
2,438,196	-		CCNA_02290	0.79	-2.0
2,438,201	-		CCNA_02290	0.79	+3.7
2,438,211	+		CCNA_02290	0.81	-1.2
2,438,211	+		CCNA_02290	0.81	-2.1
2,438,226	+		CCNA_02290	0.83	-1.4
2,438,301	+				-0.6
2,438,301	+				-0.9
2,438,301	+				-0.4
2,438,309	-				-0.2
2,438,331	-				-1.4
2,438,394	-				+0.1
2,438,398	+				+0.4
2,438,403	+				+1.4
2,438,408	+				-1.4
2,438,413	-				-0.7
2,438,416	-				-0.8
2,438,423	+				+1.4
2,438,439	+				-0.4
2,438,439	+				-1.9
2,438,447	-				-1.8
2,438,447	-				-1.6
2,438,457	-				+0.8
2,438,479	+		CCNA_02291	0.10	+2.4
2,438,512	+		CCNA_02291	0.13	+1.7
2,438,512	+		CCNA_02291	0.13	+1.4
2,438,520	-		CCNA_02291	0.14	-0.6
2,438,556	-		CCNA_02291	0.17	+0.4
2,438,563	+		CCNA_02291	0.17	-1.7
2,438,573	+		CCNA_02291	0.18	-1.7
2,438,585	+		CCNA_02291	0.19	-1.6
2,438,585	+		CCNA_02291	0.19	-0.7
2,438,590	+		CCNA_02291	0.19	-1.4
2,438,605	+		CCNA_02291	0.21	-1.3
2,438,605	+		CCNA_02291	0.21	-1.0
2,438,608	-		CCNA_02291	0.21	-1.0
2,438,608	-		CCNA_02291	0.21	-1.6
2,438,608	-		CCNA_02291	0.21	+1.1
2,438,609	+		CCNA_02291	0.21	-0.2
2,438,613	-		CCNA_02291	0.21	-1.2
2,438,615	+		CCNA_02291	0.21	+0.4
2,438,615	+		CCNA_02291	0.21	+0.8
2,438,623	-		CCNA_02291	0.22	+0.0
2,438,623	-		CCNA_02291	0.22	+1.4