Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02173

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,325,110	+		CCNA_02172	0.18	-2.2
2,325,123	+		CCNA_02172	0.19	-2.2
2,325,123	+		CCNA_02172	0.19	-2.9
2,325,131	-		CCNA_02172	0.20	+1.4
2,325,143	-		CCNA_02172	0.21	-1.8
2,325,157	+		CCNA_02172	0.22	-3.8
2,325,210	+		CCNA_02172	0.27	-1.9
2,325,215	+		CCNA_02172	0.27	-3.8
2,325,218	-		CCNA_02172	0.27	+2.4
2,325,218	-				+0.8
2,325,247	+		CCNA_02172	0.30	-3.2
2,325,255	-		CCNA_02172	0.30	-1.3
2,325,360	+		CCNA_02172	0.39	+0.1
2,325,360	+		CCNA_02172	0.39	-1.6
2,325,362	-		CCNA_02172	0.39	-0.6
2,325,367	+		CCNA_02172	0.40	+0.1
2,325,375	-		CCNA_02172	0.40	-1.3
2,325,378	+		CCNA_02172	0.40	-1.5
2,325,385	-		CCNA_02172	0.41	-1.5
2,325,396	+		CCNA_02172	0.42	-1.7
2,325,402	-		CCNA_02172	0.42	-1.8
2,325,414	-		CCNA_02172	0.43	+1.4
2,325,422	+		CCNA_02172	0.44	-2.2
2,325,441	-		CCNA_02172	0.46	-2.1
2,325,442	+		CCNA_02172	0.46	-2.8
2,325,491	+		CCNA_02172	0.50	+1.4
2,325,501	+		CCNA_02172	0.51	-1.3
2,325,546	+		CCNA_02172	0.54	-2.4
2,325,554	-		CCNA_02172	0.55	-1.5
2,325,590	+		CCNA_02172	0.58	-3.6
2,325,636	+		CCNA_02172	0.62	-2.1
2,325,654	+		CCNA_02172	0.63	-2.6
2,325,679	-		CCNA_02172	0.65	-0.4
2,325,730	+		CCNA_02172	0.70	-2.1
2,325,733	-		CCNA_02172	0.70	-0.8
2,325,765	-		CCNA_02172	0.73	+0.4
2,325,772	+		CCNA_02172	0.73	-2.9
2,325,772	+		CCNA_02172	0.73	-5.2
2,325,780	-		CCNA_02172	0.74	+0.1
2,325,780	-		CCNA_02172	0.74	-1.6
2,325,782	+		CCNA_02172	0.74	-2.6
2,325,782	+		CCNA_02172	0.74	-2.4
2,325,782	+		CCNA_02172	0.74	-2.0
2,325,812	+		CCNA_02172	0.76	-2.5
2,325,814	+		CCNA_02172	0.77	-3.5
2,325,847	-		CCNA_02172	0.79	-2.8
2,325,847	-		CCNA_02172	0.79	-3.4
2,325,864	+		CCNA_02172	0.81	-1.9
2,325,864	+		CCNA_02172	0.81	-0.4
2,325,922	+		CCNA_02172	0.86	-3.0
2,325,930	+		CCNA_02172	0.86	-2.9
2,325,938	-		CCNA_02172	0.87	-1.5
2,325,938	-		CCNA_02172	0.87	+0.1
2,325,977	+				-1.4
2,325,996	-				+0.4
2,326,025	+				-3.9
2,326,032	+				-3.6
2,326,089	+				-1.9
2,326,089	+				+0.8
2,326,089	-				+2.4
2,326,104	-				-3.0
2,326,148	+				-3.0
2,326,157	+				-3.2
2,326,157	+				-3.1
2,326,167	+		CCNA_02173	0.10	-2.1
2,326,187	+		CCNA_02173	0.13	-4.7
2,326,187	+		CCNA_02173	0.13	-0.9
2,326,187	+		CCNA_02173	0.13	-4.2
2,326,187	+		CCNA_02173	0.13	-4.3
2,326,187	+		CCNA_02173	0.13	-3.6
2,326,195	-		CCNA_02173	0.14	+1.4
2,326,195	-		CCNA_02173	0.14	-0.4
2,326,195	-		CCNA_02173	0.14	+2.4
2,326,202	-		CCNA_02173	0.15	-1.1
2,326,229	-		CCNA_02173	0.18	-1.3
2,326,319	-		CCNA_02173	0.30	+1.4
2,326,324	+		CCNA_02173	0.31	-3.1
2,326,410	-		CCNA_02173	0.42	-0.4
2,326,412	+		CCNA_02173	0.43	-0.2
2,326,434	-		CCNA_02173	0.46	-0.9
2,326,439	+		CCNA_02173	0.46	-2.9
2,326,439	+		CCNA_02173	0.46	-3.1
2,326,449	+		CCNA_02173	0.48	-3.7
2,326,465	+		CCNA_02173	0.50	-2.3
2,326,519	+		CCNA_02173	0.57	-4.1
2,326,519	+		CCNA_02173	0.57	-2.5
2,326,519	+		CCNA_02173	0.57	-0.2
2,326,519	+		CCNA_02173	0.57	-3.7
2,326,519	+		CCNA_02173	0.57	-1.6
2,326,519	+		CCNA_02173	0.57	-1.6
2,326,519	+		CCNA_02173	0.57	-4.3
2,326,527	-		CCNA_02173	0.58	-0.8
2,326,527	-		CCNA_02173	0.58	-2.6
2,326,527	-		CCNA_02173	0.58	-3.5
2,326,527	-		CCNA_02173	0.58	-1.8
2,326,527	-		CCNA_02173	0.58	-3.0
2,326,527	-				+0.8
2,326,527	-		CCNA_02173	0.58	-5.3
2,326,527	-		CCNA_02173	0.58	-2.8
2,326,546	+		CCNA_02173	0.61	-2.5
2,326,554	-		CCNA_02173	0.62	-1.1
2,326,581	+		CCNA_02173	0.65	-3.2
2,326,581	+		CCNA_02173	0.65	-0.6
2,326,616	+		CCNA_02173	0.70	-3.8
2,326,692	+		CCNA_02173	0.80	-3.2
2,326,715	+		CCNA_02173	0.83	-3.7
2,326,753	-		CCNA_02173	0.88	-0.4
2,326,814	+				-3.4
2,326,898	+				-1.2
2,326,906	-				-0.8
2,326,928	+				-1.8
2,326,954	-				-1.7
2,327,021	+		CCNA_02174	0.16	-3.0
2,327,026	+		CCNA_02174	0.16	-3.6
2,327,026	+		CCNA_02174	0.16	-2.6
2,327,026	+		CCNA_02174	0.16	-3.6
2,327,026	+		CCNA_02174	0.16	-2.9
2,327,026	+		CCNA_02174	0.16	-2.7
2,327,026	+		CCNA_02174	0.16	-4.0
2,327,026	+		CCNA_02174	0.16	-4.6
2,327,026	+		CCNA_02174	0.16	-3.2
2,327,034	-		CCNA_02174	0.17	-0.4
2,327,034	-		CCNA_02174	0.17	-0.9
2,327,034	-		CCNA_02174	0.17	+0.4
2,327,034	-		CCNA_02174	0.17	-1.0
2,327,034	-		CCNA_02174	0.17	+0.1
2,327,101	-		CCNA_02174	0.24	-0.4
2,327,137	+		CCNA_02174	0.27	-3.6
2,327,137	+		CCNA_02174	0.27	-2.9
2,327,154	-		CCNA_02174	0.29	+0.4
2,327,179	-		CCNA_02174	0.32	-2.0
2,327,197	-		CCNA_02174	0.33	-1.3
2,327,197	-		CCNA_02174	0.33	-1.1
2,327,197	-		CCNA_02174	0.33	-2.3
2,327,200	+		CCNA_02174	0.34	-3.4
2,327,202	-		CCNA_02174	0.34	+2.4
2,327,226	+		CCNA_02174	0.36	-0.9
2,327,270	+		CCNA_02174	0.41	-2.9
2,327,287	+		CCNA_02174	0.42	-2.8
2,327,349	-		CCNA_02174	0.48	-1.5
2,327,363	+		CCNA_02174	0.50	-3.3
2,327,363	+		CCNA_02174	0.50	-3.7
2,327,363	+		CCNA_02174	0.50	-3.9
2,327,371	-		CCNA_02174	0.51	-0.2
2,327,371	-		CCNA_02174	0.51	-0.6
2,327,376	-		CCNA_02174	0.51	-2.2
2,327,376	-		CCNA_02174	0.51	+0.1
2,327,396	-		CCNA_02174	0.53	-1.5
2,327,522	-		CCNA_02174	0.66	-1.8
2,327,621	+		CCNA_02174	0.76	-4.7
2,327,650	-		CCNA_02174	0.78	-0.2
2,327,650	-		CCNA_02174	0.78	+0.2
2,327,650	-		CCNA_02174	0.78	-0.9
2,327,650	-		CCNA_02174	0.78	-2.2
2,327,650	-		CCNA_02174	0.78	-2.7
2,327,650	-		CCNA_02174	0.78	+0.1
2,327,662	+		CCNA_02174	0.80	-2.0
2,327,678	-		CCNA_02174	0.81	+0.8
2,327,691	+		CCNA_02174	0.82	-5.0
2,327,691	+		CCNA_02174	0.82	-2.4
2,327,699	-		CCNA_02174	0.83	-1.3
2,327,699	-		CCNA_02174	0.83	-0.4
2,327,699	-		CCNA_02174	0.83	-1.2
2,327,734	-		CCNA_02174	0.87	-3.7
2,327,734	-		CCNA_02174	0.87	-1.1