Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02157

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,312,640	-		CCNA_02156	0.43	+4.2
2,312,645	-		CCNA_02156	0.43	+4.2
2,312,692	+		CCNA_02156	0.46	-1.2
2,312,728	-		CCNA_02156	0.49	+3.2
2,312,849	+		CCNA_02156	0.57	+0.8
2,312,849	+		CCNA_02156	0.57	-0.4
2,312,857	-		CCNA_02156	0.58	+3.9
2,312,857	-		CCNA_02156	0.58	+3.9
2,312,857	-		CCNA_02156	0.58	+4.1
2,312,857	-		CCNA_02156	0.58	+4.3
2,312,859	+		CCNA_02156	0.58	+0.8
2,312,859	+		CCNA_02156	0.58	-1.3
2,312,859	+		CCNA_02156	0.58	+1.4
2,312,867	-		CCNA_02156	0.59	+3.4
2,312,867	-		CCNA_02156	0.59	+3.6
2,312,867	-		CCNA_02156	0.59	+3.7
2,312,867	-		CCNA_02156	0.59	+4.0
2,312,867	-		CCNA_02156	0.59	+3.7
2,312,867	-		CCNA_02156	0.59	+4.0
2,312,867	-		CCNA_02156	0.59	+3.5
2,312,927	-		CCNA_02156	0.63	+4.1
2,312,927	-		CCNA_02156	0.63	+3.8
2,312,927	-		CCNA_02156	0.63	+3.8
2,312,960	-		CCNA_02156	0.65	+3.7
2,312,967	-		CCNA_02156	0.66	+3.6
2,313,052	+		CCNA_02156	0.72	+0.4
2,313,072	-		CCNA_02156	0.73	+4.7
2,313,156	+		CCNA_02156	0.79	-0.7
2,313,161	+		CCNA_02156	0.79	+2.4
2,313,176	-		CCNA_02156	0.80	+3.7
2,313,176	-		CCNA_02156	0.80	+3.8
2,313,183	+		CCNA_02156	0.81	+1.4
2,313,192	+		CCNA_02156	0.82	+0.3
2,313,206	+		CCNA_02156	0.83	-1.4
2,313,322	+				+0.1
2,313,325	-				-0.0
2,313,434	+				+0.1
2,313,442	-				-1.6
2,313,461	+				+0.1
2,313,461	+				-0.2
2,313,469	-				-0.8
2,313,469	-				+2.4
2,313,469	-				-1.7
2,313,469	-				-0.6
2,313,469	-				-0.3
2,313,474	-				+0.4
2,313,535	-		CCNA_02157	0.21	+3.7
2,313,545	-		CCNA_02157	0.24	+3.6
2,313,545	-		CCNA_02157	0.24	+4.2
2,313,574	+		CCNA_02157	0.32	-0.6
2,313,576	+		CCNA_02157	0.32	+0.8
2,313,591	-		CCNA_02157	0.37	+4.1
2,313,596	-		CCNA_02157	0.38	+2.9
2,313,596	-		CCNA_02157	0.38	+3.6
2,313,603	-		CCNA_02157	0.40	+3.4
2,313,673	-		CCNA_02157	0.60	+3.7
2,313,673	-		CCNA_02157	0.60	+3.3
2,313,704	-		CCNA_02157	0.69	+5.1
2,313,709	-		CCNA_02157	0.71	+4.3
2,313,714	-		CCNA_02157	0.72	+4.6
2,313,772	-		CCNA_02157	0.89	+2.9
2,313,790	+				-0.6
2,313,810	+				+0.6
2,313,818	-				-1.0
2,313,818	-				-0.6
2,313,818	-				+0.1
2,313,818	-				-0.9
2,313,818	-				-0.7
2,313,853	+				-0.2
2,313,905	-				-0.1
2,313,905	-				+1.4
2,313,906	+				-1.0
2,313,965	+				-0.2
2,314,001	-				+0.1
2,314,021	+				-0.4
2,314,036	+				-1.2
2,314,036	+				-1.3
2,314,046	+				-0.4
2,314,067	-		CCNA_02158	0.10	-0.4
2,314,075	-		CCNA_02158	0.11	+0.1
2,314,077	-		CCNA_02158	0.11	-0.2
2,314,077	-		CCNA_02158	0.11	+1.4
2,314,160	-		CCNA_02158	0.20	-1.2
2,314,176	+		CCNA_02158	0.22	-1.3
2,314,205	+		CCNA_02158	0.25	-0.8
2,314,284	+		CCNA_02158	0.33	-1.3
2,314,286	+		CCNA_02158	0.33	-3.0
2,314,295	+		CCNA_02158	0.34	+0.8
2,314,314	+		CCNA_02158	0.36	+0.1
2,314,332	-		CCNA_02158	0.38	+0.8
2,314,339	+		CCNA_02158	0.39	-0.6
2,314,344	+		CCNA_02158	0.39	-0.3
2,314,353	-		CCNA_02158	0.40	-0.5
2,314,354	-		CCNA_02158	0.40	-2.1
2,314,375	+		CCNA_02158	0.43	-0.4
2,314,375	+		CCNA_02158	0.43	-1.5
2,314,397	-		CCNA_02158	0.45	-0.6
2,314,427	+		CCNA_02158	0.48	-1.6
2,314,444	-		CCNA_02158	0.50	+0.1
2,314,449	-		CCNA_02158	0.50	-1.8
2,314,457	-		CCNA_02158	0.51	-0.9
2,314,485	+		CCNA_02158	0.54	+1.5
2,314,513	+		CCNA_02158	0.57	-0.3
2,314,522	-		CCNA_02158	0.58	+0.4
2,314,557	+		CCNA_02158	0.62	+1.4
2,314,565	-		CCNA_02158	0.62	+0.2
2,314,565	-		CCNA_02158	0.62	+1.0
2,314,580	-		CCNA_02158	0.64	+2.2
2,314,607	+		CCNA_02158	0.67	-1.1
2,314,619	-		CCNA_02158	0.68	+0.2
2,314,639	+		CCNA_02158	0.70	-0.8
2,314,639	+		CCNA_02158	0.70	-0.6
2,314,639	+		CCNA_02158	0.70	-0.8
2,314,639	+		CCNA_02158	0.70	-1.6
2,314,639	+				+0.8
2,314,647	-		CCNA_02158	0.71	+0.4
2,314,650	+		CCNA_02158	0.71	-0.5
2,314,650	+		CCNA_02158	0.71	-0.6
2,314,658	-		CCNA_02158	0.72	-0.2
2,314,670	+		CCNA_02158	0.73	-0.4
2,314,670	+		CCNA_02158	0.73	-1.2
2,314,673	-		CCNA_02158	0.74	+0.5
2,314,673	-		CCNA_02158	0.74	+2.4
2,314,673	-		CCNA_02158	0.74	+0.7
2,314,673	-		CCNA_02158	0.74	-0.4
2,314,675	+		CCNA_02158	0.74	-0.9
2,314,678	-		CCNA_02158	0.74	+0.1
2,314,678	-		CCNA_02158	0.74	-0.4
2,314,683	-		CCNA_02158	0.75	-0.4
2,314,683	-		CCNA_02158	0.75	+1.1
2,314,689	+		CCNA_02158	0.75	-0.8
2,314,693	+		CCNA_02158	0.76	+0.1
2,314,695	-		CCNA_02158	0.76	-0.8
2,314,695	-		CCNA_02158	0.76	-0.2
2,314,741	-		CCNA_02158	0.81	+0.8
2,314,744	+		CCNA_02158	0.81	+0.4
2,314,747	-		CCNA_02158	0.81	-0.6
2,314,752	-		CCNA_02158	0.82	+0.5
2,314,765	-		CCNA_02158	0.83	-1.3
2,314,771	-		CCNA_02158	0.84	-1.5
2,314,805	+		CCNA_02158	0.87	+0.4
2,314,805	+		CCNA_02158	0.87	-0.2
2,314,805	+		CCNA_02158	0.87	+0.6
2,314,806	-		CCNA_02158	0.88	-0.5