Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02143

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,300,570	+				+0.8
2,300,627	+				+0.4
2,300,635	-				+0.1
2,300,635	-				-1.1
2,300,635	-				-0.6
2,300,760	+				-0.9
2,300,769	+				-1.7
2,300,777	-				-0.9
2,300,855	+		CCNA_02142	0.11	-0.6
2,300,855	+		CCNA_02142	0.11	+0.6
2,300,863	-		CCNA_02142	0.12	-2.6
2,300,891	-		CCNA_02142	0.16	+1.4
2,300,906	+		CCNA_02142	0.18	+0.7
2,300,914	-		CCNA_02142	0.19	+2.1
2,300,914	-		CCNA_02142	0.19	+0.5
2,300,914	-		CCNA_02142	0.19	+1.0
2,300,916	+		CCNA_02142	0.20	+0.1
2,300,921	+		CCNA_02142	0.20	-1.3
2,300,930	-		CCNA_02142	0.21	+0.8
2,300,930	-		CCNA_02142	0.21	-1.1
2,300,997	+		CCNA_02142	0.30	-2.4
2,301,033	+		CCNA_02142	0.35	-1.8
2,301,033	+		CCNA_02142	0.35	+0.1
2,301,040	-		CCNA_02142	0.36	-1.3
2,301,050	+		CCNA_02142	0.38	-3.1
2,301,051	+		CCNA_02142	0.38	+0.8
2,301,051	+		CCNA_02142	0.38	+0.1
2,301,071	+		CCNA_02142	0.41	+1.8
2,301,074	-		CCNA_02142	0.41	-1.4
2,301,131	-		CCNA_02142	0.49	-1.4
2,301,136	+		CCNA_02142	0.49	+0.8
2,301,164	+		CCNA_02142	0.53	+1.1
2,301,164	+		CCNA_02142	0.53	-0.4
2,301,164	+		CCNA_02142	0.53	-0.9
2,301,172	-		CCNA_02142	0.54	+2.4
2,301,172	-		CCNA_02142	0.54	-1.5
2,301,175	+		CCNA_02142	0.55	-0.4
2,301,190	-		CCNA_02142	0.57	+0.8
2,301,206	+		CCNA_02142	0.59	-0.4
2,301,233	-		CCNA_02142	0.62	-0.3
2,301,268	+		CCNA_02142	0.67	+0.0
2,301,270	+		CCNA_02142	0.67	+0.3
2,301,344	+		CCNA_02142	0.78	+0.2
2,301,352	-		CCNA_02142	0.79	-1.4
2,301,380	+		CCNA_02142	0.82	+1.6
2,301,388	-		CCNA_02142	0.83	-0.8
2,301,388	-		CCNA_02142	0.83	-0.8
2,301,426	+		CCNA_02142	0.89	+1.1
2,301,434	-		CCNA_02142	0.90	-1.0
2,301,449	-				-2.9
2,301,494	+				-0.6
2,301,499	+				-0.5
2,301,537	-				+1.4
2,301,549	+				-0.4
2,301,559	-				-0.6
2,301,581	-				-0.2
2,301,611	-		CCNA_02143	0.11	-1.6
2,301,639	+		CCNA_02143	0.15	+0.4
2,301,696	+		CCNA_02143	0.22	+0.2
2,301,751	+		CCNA_02143	0.29	-1.0
2,301,766	+		CCNA_02143	0.31	+1.0
2,301,776	+		CCNA_02143	0.32	-1.1
2,301,776	+		CCNA_02143	0.32	+0.5
2,301,776	+		CCNA_02143	0.32	-2.0
2,301,776	+		CCNA_02143	0.32	-2.1
2,301,776	+		CCNA_02143	0.32	-1.8
2,301,776	+		CCNA_02143	0.32	-2.4
2,301,784	-		CCNA_02143	0.33	+0.4
2,301,784	-		CCNA_02143	0.33	-1.7
2,301,784	-		CCNA_02143	0.33	-1.3
2,301,784	-		CCNA_02143	0.33	+0.8
2,301,784	-		CCNA_02143	0.33	-0.2
2,301,786	+		CCNA_02143	0.33	+0.7
2,301,816	+		CCNA_02143	0.37	+1.0
2,301,836	+		CCNA_02143	0.40	-0.8
2,301,859	+		CCNA_02143	0.43	+1.8
2,301,893	+		CCNA_02143	0.47	-0.5
2,301,898	+		CCNA_02143	0.48	-0.8
2,301,980	+		CCNA_02143	0.58	-0.1
2,302,010	-		CCNA_02143	0.62	+1.1
2,302,014	+		CCNA_02143	0.62	-0.6
2,302,028	-		CCNA_02143	0.64	-1.5
2,302,059	+		CCNA_02143	0.68	+0.3
2,302,078	-		CCNA_02143	0.70	+0.1
2,302,170	+		CCNA_02143	0.82	+0.1
2,302,178	-		CCNA_02143	0.83	+0.4
2,302,183	-		CCNA_02143	0.84	-2.5
2,302,184	+		CCNA_02143	0.84	-2.8
2,302,216	+		CCNA_02143	0.88	+0.6
2,302,221	+		CCNA_02143	0.88	+0.8
2,302,223	+		CCNA_02143	0.89	+3.4
2,302,224	-		CCNA_02143	0.89	-1.7
2,302,228	+		CCNA_02143	0.89	+1.1
2,302,229	-		CCNA_02143	0.89	-2.0
2,302,259	-				+1.1
2,302,323	-				-2.4
2,302,351	+				+1.6
2,302,359	-				+0.7
2,302,366	+				+1.2
2,302,450	+		CCNA_02144	0.17	-0.4
2,302,456	-		CCNA_02144	0.17	+1.1
2,302,499	-		CCNA_02144	0.23	-2.3
2,302,504	+		CCNA_02144	0.23	+0.6
2,302,529	+		CCNA_02144	0.26	-0.8
2,302,540	-		CCNA_02144	0.28	-2.1
2,302,556	+		CCNA_02144	0.30	+0.4
2,302,556	+		CCNA_02144	0.30	+0.6
2,302,561	+		CCNA_02144	0.30	+1.2
2,302,562	+		CCNA_02144	0.31	+0.7
2,302,562	+		CCNA_02144	0.31	+1.5
2,302,569	-		CCNA_02144	0.31	-0.8
2,302,570	-		CCNA_02144	0.32	+0.1
2,302,570	-		CCNA_02144	0.32	-0.8
2,302,570	-		CCNA_02144	0.32	-2.3
2,302,573	+		CCNA_02144	0.32	+0.3
2,302,573	+		CCNA_02144	0.32	+1.2
2,302,581	-		CCNA_02144	0.33	-0.8
2,302,647	+		CCNA_02144	0.41	+0.8
2,302,647	+		CCNA_02144	0.41	+0.9
2,302,655	-		CCNA_02144	0.42	-2.1
2,302,655	-		CCNA_02144	0.42	-1.8
2,302,711	+		CCNA_02144	0.49	+1.7
2,302,759	-		CCNA_02144	0.55	-0.4
2,302,761	+		CCNA_02144	0.55	-0.4
2,302,808	+		CCNA_02144	0.61	+0.7
2,302,868	+		CCNA_02144	0.69	+0.2
2,302,886	+		CCNA_02144	0.71	-0.1
2,302,894	-		CCNA_02144	0.72	-1.2
2,302,901	+		CCNA_02144	0.73	+1.5
2,302,917	+		CCNA_02144	0.75	+0.1
2,302,925	-		CCNA_02144	0.76	-3.5
2,302,946	+		CCNA_02144	0.78	+0.9
2,302,946	+		CCNA_02144	0.78	+1.2
2,302,957	+		CCNA_02144	0.80	-1.2
2,302,959	-		CCNA_02144	0.80	-0.8
2,302,959	-		CCNA_02144	0.80	-2.0
2,302,959	-		CCNA_02144	0.80	+2.4
2,302,959	-		CCNA_02144	0.80	-1.5
2,302,994	+		CCNA_02144	0.84	-0.0
2,302,996	+		CCNA_02144	0.85	+0.6
2,303,002	-		CCNA_02144	0.85	-1.4
2,303,002	-		CCNA_02144	0.85	-0.2
2,303,034	-		CCNA_02144	0.89	-1.2
2,303,069	+				+1.4
2,303,122	-				+2.4
2,303,123	+				+0.4
2,303,123	+				-1.4
2,303,157	+				+0.0
2,303,197	+				+0.8
2,303,272	-		CCNA_02145	0.19	-2.3