Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02129

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,281,732	-		CCNA_02128	0.23	+0.3
2,281,741	+		CCNA_02128	0.24	+0.0
2,281,741	+		CCNA_02128	0.24	+0.0
2,281,749	-		CCNA_02128	0.25	-1.0
2,281,780	-		CCNA_02128	0.27	-1.5
2,281,838	+		CCNA_02128	0.32	-1.2
2,281,880	+		CCNA_02128	0.35	-1.6
2,281,887	-		CCNA_02128	0.36	-1.1
2,281,910	-		CCNA_02128	0.38	+2.3
2,281,910	-		CCNA_02128	0.38	+0.2
2,281,914	+		CCNA_02128	0.38	-1.4
2,281,914	+		CCNA_02128	0.38	+0.8
2,281,914	+		CCNA_02128	0.38	-0.5
2,281,950	+		CCNA_02128	0.41	-1.0
2,282,065	+		CCNA_02128	0.51	+0.1
2,282,088	+		CCNA_02128	0.53	-1.8
2,282,127	-		CCNA_02128	0.56	-1.0
2,282,139	+		CCNA_02128	0.57	+2.3
2,282,154	-		CCNA_02128	0.58	-1.1
2,282,169	-		CCNA_02128	0.59	-1.9
2,282,174	-		CCNA_02128	0.60	-1.1
2,282,190	+		CCNA_02128	0.61	-1.0
2,282,197	+		CCNA_02128	0.62	-0.5
2,282,209	+		CCNA_02128	0.63	+0.3
2,282,217	-		CCNA_02128	0.63	+1.3
2,282,217	-		CCNA_02128	0.63	+0.0
2,282,233	-		CCNA_02128	0.65	-2.1
2,282,360	+		CCNA_02128	0.75	+0.8
2,282,360	+		CCNA_02128	0.75	-0.5
2,282,417	+				+1.3
2,282,481	+		CCNA_02128	0.85	-1.1
2,282,497	-		CCNA_02128	0.87	+0.0
2,282,503	+		CCNA_02128	0.87	+1.3
2,282,518	+		CCNA_02128	0.88	-1.8
2,282,563	-				-1.4
2,282,602	-				+4.0
2,282,620	+				-2.0
2,282,632	+				-0.8
2,282,640	-				+1.3
2,282,667	+				-1.5
2,282,667	+				-1.8
2,282,706	-				-1.8
2,282,730	-				+1.4
2,282,740	-				+0.4
2,282,757	-				-0.8
2,282,773	+				-1.6
2,282,778	+				+0.4
2,282,810	-				+0.1
2,282,846	+		CCNA_02129	0.10	-0.6
2,282,854	-		CCNA_02129	0.11	-0.5
2,282,875	+		CCNA_02129	0.13	+0.0
2,282,902	-		CCNA_02129	0.15	-0.6
2,282,926	+		CCNA_02129	0.17	-0.2
2,282,926	+		CCNA_02129	0.17	-1.9
2,282,926	+		CCNA_02129	0.17	-2.7
2,282,926	+		CCNA_02129	0.17	-2.1
2,282,934	-		CCNA_02129	0.18	-0.6
2,282,934	-		CCNA_02129	0.18	-0.8
2,282,955	-		CCNA_02129	0.20	-2.2
2,282,955	-		CCNA_02129	0.20	-0.5
2,282,969	+		CCNA_02129	0.21	-0.2
2,282,969	+		CCNA_02129	0.21	-0.6
2,283,057	+		CCNA_02129	0.29	+0.2
2,283,065	-		CCNA_02129	0.29	-0.1
2,283,187	+		CCNA_02129	0.40	+0.6
2,283,202	-		CCNA_02129	0.42	-1.2
2,283,225	+		CCNA_02129	0.44	-1.9
2,283,246	-		CCNA_02129	0.45	-2.0
2,283,251	-		CCNA_02129	0.46	-1.2
2,283,272	-		CCNA_02129	0.48	-0.8
2,283,277	+		CCNA_02129	0.48	+1.4
2,283,278	-		CCNA_02129	0.48	-1.6
2,283,280	-		CCNA_02129	0.48	-1.0
2,283,282	+		CCNA_02129	0.49	-0.2
2,283,290	-		CCNA_02129	0.49	-0.5
2,283,310	-		CCNA_02129	0.51	-3.2
2,283,325	-		CCNA_02129	0.52	-1.1
2,283,328	+		CCNA_02129	0.53	-1.1
2,283,402	-		CCNA_02129	0.59	+0.0
2,283,402	-		CCNA_02129	0.59	-2.6
2,283,405	+		CCNA_02129	0.59	-0.6
2,283,414	+		CCNA_02129	0.60	+0.2
2,283,414	+		CCNA_02129	0.60	-1.1
2,283,414	+		CCNA_02129	0.60	-2.6
2,283,414	+		CCNA_02129	0.60	+0.8
2,283,422	-		CCNA_02129	0.61	-1.6
2,283,422	-		CCNA_02129	0.61	-1.6
2,283,422	-		CCNA_02129	0.61	+1.4
2,283,436	+		CCNA_02129	0.62	-0.6
2,283,437	-		CCNA_02129	0.62	-1.7
2,283,472	+		CCNA_02129	0.65	-0.6
2,283,472	-		CCNA_02129	0.65	+1.4
2,283,505	+		CCNA_02129	0.68	-1.6
2,283,513	-		CCNA_02129	0.69	+0.0
2,283,513	-		CCNA_02129	0.69	+0.8
2,283,513	-		CCNA_02129	0.69	-0.2
2,283,513	-		CCNA_02129	0.69	+0.5
2,283,518	-		CCNA_02129	0.69	+0.4
2,283,518	-		CCNA_02129	0.69	-1.0
2,283,523	-		CCNA_02129	0.70	-2.0
2,283,543	+		CCNA_02129	0.72	-1.9
2,283,547	-		CCNA_02129	0.72	-0.5
2,283,555	+		CCNA_02129	0.73	-1.3
2,283,555	+		CCNA_02129	0.73	-1.0
2,283,563	-		CCNA_02129	0.73	-1.5
2,283,565	+		CCNA_02129	0.74	-2.8
2,283,573	-		CCNA_02129	0.74	+0.8
2,283,573	-		CCNA_02129	0.74	-1.3
2,283,573	-		CCNA_02129	0.74	-0.8
2,283,605	-		CCNA_02129	0.77	+0.0
2,283,649	+		CCNA_02129	0.81	-0.8
2,283,684	+		CCNA_02129	0.84	+0.8
2,283,684	+		CCNA_02129	0.84	-1.3
2,283,684	+		CCNA_02129	0.84	+0.9
2,283,692	-		CCNA_02129	0.85	+1.4
2,283,692	-		CCNA_02129	0.85	+1.0
2,283,717	+		CCNA_02129	0.87	-1.2
2,283,722	+		CCNA_02129	0.87	+0.8
2,283,727	+		CCNA_02129	0.88	-0.2
2,283,732	+		CCNA_02129	0.88	+0.4
2,283,775	-				+0.4
2,283,818	-				-0.8
2,283,918	+				-0.6
2,283,948	-				+0.8
2,283,965	+				-0.6
2,283,998	+				+0.4
2,284,049	-				+1.1
2,284,056	-				-0.6
2,284,057	-				+1.9
2,284,092	-		CCNA_02130	0.11	-1.4
2,284,094	+		CCNA_02130	0.12	-0.9
2,284,117	+		CCNA_02130	0.13	-0.2
2,284,117	+		CCNA_02130	0.13	-1.8
2,284,117	+		CCNA_02130	0.13	-1.0
2,284,125	+		CCNA_02130	0.14	-1.2
2,284,125	+		CCNA_02130	0.14	+1.4
2,284,125	+		CCNA_02130	0.14	+1.1
2,284,125	+		CCNA_02130	0.14	-1.4
2,284,128	-		CCNA_02130	0.14	+0.8
2,284,133	-		CCNA_02130	0.14	-0.2
2,284,133	-		CCNA_02130	0.14	-1.0
2,284,133	-		CCNA_02130	0.14	+0.4
2,284,139	+		CCNA_02130	0.15	-0.4
2,284,152	+		CCNA_02130	0.16	-2.6
2,284,152	+		CCNA_02130	0.16	-1.1
2,284,152	+		CCNA_02130	0.16	+1.8
2,284,160	-		CCNA_02130	0.16	+0.6
2,284,160	-		CCNA_02130	0.16	+0.0
2,284,160	-		CCNA_02130	0.16	+1.0
2,284,172	+		CCNA_02130	0.17	-2.7
2,284,172	+		CCNA_02130	0.17	+0.4
2,284,180	-		CCNA_02130	0.18	-2.1
2,284,185	-		CCNA_02130	0.18	+3.9
2,284,222	+		CCNA_02130	0.20	+0.1
2,284,240	-		CCNA_02130	0.22	-0.4
2,284,327	-		CCNA_02130	0.28	+0.6
2,284,327	-		CCNA_02130	0.28	-1.7
2,284,329	+		CCNA_02130	0.28	-0.4
2,284,332	-		CCNA_02130	0.28	-0.3
2,284,337	-		CCNA_02130	0.29	+0.4
2,284,339	+		CCNA_02130	0.29	+0.8
2,284,339	+		CCNA_02130	0.29	+0.8
2,284,342	-		CCNA_02130	0.29	+0.8
2,284,347	-		CCNA_02130	0.29	+0.5
2,284,457	+		CCNA_02130	0.37	-1.1
2,284,457	+		CCNA_02130	0.37	-0.6
2,284,465	-		CCNA_02130	0.37	-0.8
2,284,487	-		CCNA_02130	0.39	+0.3
2,284,503	-		CCNA_02130	0.40	+0.1
2,284,559	-		CCNA_02130	0.44	-1.9
2,284,581	+		CCNA_02130	0.46	-1.3
2,284,596	+		CCNA_02130	0.47	-1.9
2,284,715	-		CCNA_02130	0.55	-1.9
2,284,730	+		CCNA_02130	0.56	+1.5
2,284,755	+		CCNA_02130	0.58	+0.1
2,284,760	+		CCNA_02130	0.58	-1.5
2,284,762	+		CCNA_02130	0.58	+1.4
2,284,762	+		CCNA_02130	0.58	+0.4
2,284,763	-		CCNA_02130	0.58	-1.2
2,284,763	-		CCNA_02130	0.58	+1.4
2,284,763	-		CCNA_02130	0.58	+2.1
2,284,763	-		CCNA_02130	0.58	-1.5
2,284,770	-		CCNA_02130	0.59	+0.7
2,284,772	+		CCNA_02130	0.59	-1.1
2,284,774	+		CCNA_02130	0.59	-0.6
2,284,781	+		CCNA_02130	0.60	+0.1
2,284,781	+		CCNA_02130	0.60	-1.3
2,284,794	-		CCNA_02130	0.60	-1.8
2,284,794	-		CCNA_02130	0.60	+1.4
2,284,804	-		CCNA_02130	0.61	-0.4
2,284,804	-		CCNA_02130	0.61	-0.1
2,284,820	+		CCNA_02130	0.62	+0.1
2,284,820	+		CCNA_02130	0.62	-2.1
2,284,820	+		CCNA_02130	0.62	-0.6
2,284,828	-		CCNA_02130	0.63	-0.0
2,284,835	+		CCNA_02130	0.63	+0.8