Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02112

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,260,541	-		CCNA_02110	0.52	-1.0
2,260,643	+		CCNA_02110	0.75	-0.5
2,260,643	+		CCNA_02110	0.75	+1.4
2,260,643	+		CCNA_02110	0.75	+0.8
2,260,643	+		CCNA_02110	0.75	-1.1
2,260,651	-		CCNA_02110	0.77	+2.4
2,260,651	-		CCNA_02110	0.77	-1.2
2,260,679	-		CCNA_02110	0.84	-1.7
2,260,684	-		CCNA_02110	0.85	-0.4
2,260,714	-				-1.9
2,260,751	-				-0.6
2,260,756	-				-2.5
2,260,767	-				+1.3
2,260,773	+				-1.2
2,260,789	+				+0.3
2,260,796	-				-2.5
2,260,841	-		CCNA_02111	0.15	+1.8
2,260,883	-		CCNA_02111	0.22	-2.2
2,260,936	-		CCNA_02111	0.32	-1.1
2,260,948	+		CCNA_02111	0.34	-0.8
2,260,956	-		CCNA_02111	0.35	-0.8
2,260,956	-		CCNA_02111	0.35	-3.3
2,260,970	-		CCNA_02111	0.38	+0.3
2,260,981	+		CCNA_02111	0.40	+1.3
2,261,007	+		CCNA_02111	0.45	-1.4
2,261,025	-		CCNA_02111	0.48	+0.0
2,261,109	-		CCNA_02111	0.63	-1.1
2,261,136	-		CCNA_02111	0.68	-0.7
2,261,162	+		CCNA_02111	0.72	+0.0
2,261,162	+		CCNA_02111	0.72	-1.4
2,261,170	-		CCNA_02111	0.74	-0.7
2,261,170	-		CCNA_02111	0.74	-0.8
2,261,170	-		CCNA_02111	0.74	-1.7
2,261,170	-		CCNA_02111	0.74	-0.8
2,261,177	-		CCNA_02111	0.75	-0.8
2,261,189	+		CCNA_02111	0.77	-1.2
2,261,197	-		CCNA_02111	0.79	-0.9
2,261,208	+		CCNA_02111	0.81	+0.8
2,261,208	+		CCNA_02111	0.81	-0.5
2,261,210	-		CCNA_02111	0.81	-1.8
2,261,244	+		CCNA_02111	0.87	+0.0
2,261,249	+		CCNA_02111	0.88	+0.3
2,261,249	+		CCNA_02111	0.88	-1.0
2,261,257	-		CCNA_02111	0.90	-0.5
2,261,257	-		CCNA_02111	0.90	+1.6
2,261,309	+				+0.8
2,261,334	+				+1.3
2,261,339	+				+0.1
2,261,342	-				-2.7
2,261,342	-				+0.0
2,261,342	-				-1.5
2,261,342	-				-0.7
2,261,352	+				-2.2
2,261,372	-				-0.1
2,261,381	-				-2.0
2,261,427	+				+0.8
2,261,437	+				+0.3
2,261,437	+				-2.0
2,261,437	-				+0.8
2,261,453	+				+0.3
2,261,453	+				+0.3
2,261,463	+				-1.2
2,261,463	+				-1.7
2,261,472	-				+0.8
2,261,479	+				-1.2
2,261,530	-				+0.3
2,261,530	-				-0.2
2,261,535	+				-1.4
2,261,587	-				-1.6
2,261,596	-				-1.1
2,261,596	-				+3.3
2,261,618	+				-2.3
2,261,638	-				-0.1
2,261,653	+		CCNA_02112	0.11	-1.1
2,261,666	-		CCNA_02112	0.13	-1.0
2,261,697	-		CCNA_02112	0.16	-2.2
2,261,712	+		CCNA_02112	0.17	-3.1
2,261,712	+		CCNA_02112	0.17	-2.6
2,261,717	+		CCNA_02112	0.18	+0.0
2,261,720	-		CCNA_02112	0.18	-1.7
2,261,735	-		CCNA_02112	0.20	-0.3
2,261,736	-		CCNA_02112	0.20	-0.5
2,261,744	-		CCNA_02112	0.21	-1.1
2,261,747	+		CCNA_02112	0.21	-0.4
2,261,754	+		CCNA_02112	0.22	-0.5
2,261,764	+		CCNA_02112	0.23	+1.6
2,261,767	-		CCNA_02112	0.23	-2.7
2,261,772	+		CCNA_02112	0.23	+0.4
2,261,772	+		CCNA_02112	0.23	-1.7
2,261,780	-		CCNA_02112	0.24	-1.4
2,261,793	-		CCNA_02112	0.25	-1.0
2,261,819	+		CCNA_02112	0.28	-2.4
2,261,829	-		CCNA_02112	0.29	-2.2
2,261,847	-		CCNA_02112	0.31	-0.3
2,261,847	-		CCNA_02112	0.31	-0.5
2,261,882	-		CCNA_02112	0.34	-0.0
2,261,886	+		CCNA_02112	0.35	+1.4
2,261,888	+		CCNA_02112	0.35	+1.6
2,261,913	+				+2.3
2,261,921	-		CCNA_02112	0.38	-0.7
2,261,923	+		CCNA_02112	0.38	-0.1
2,261,923	+		CCNA_02112	0.38	-0.7
2,261,945	+		CCNA_02112	0.41	-1.5
2,261,958	-		CCNA_02112	0.42	+0.2
2,261,977	+		CCNA_02112	0.44	-0.5
2,261,979	+				+0.7
2,261,985	-		CCNA_02112	0.45	+2.3
2,261,992	-		CCNA_02112	0.45	-0.8
2,261,992	-		CCNA_02112	0.45	-0.7
2,262,031	+		CCNA_02112	0.49	+2.1
2,262,037	-		CCNA_02112	0.50	-1.8
2,262,115	+		CCNA_02112	0.58	+0.5
2,262,158	+		CCNA_02112	0.62	-0.1
2,262,166	-		CCNA_02112	0.63	+0.7
2,262,166	-		CCNA_02112	0.63	-0.3
2,262,169	+		CCNA_02112	0.63	-0.9
2,262,177	-		CCNA_02112	0.64	-2.8
2,262,200	-		CCNA_02112	0.66	-0.5
2,262,210	-		CCNA_02112	0.67	+1.3
2,262,211	-		CCNA_02112	0.67	-0.1
2,262,222	+		CCNA_02112	0.68	+1.9
2,262,223	+		CCNA_02112	0.68	+1.1
2,262,223	+		CCNA_02112	0.68	-1.4
2,262,259	+		CCNA_02112	0.72	-0.4
2,262,326	-		CCNA_02112	0.79	-1.3
2,262,339	+		CCNA_02112	0.80	-0.5
2,262,356	+		CCNA_02112	0.82	+1.5
2,262,364	-		CCNA_02112	0.82	-0.9
2,262,394	-		CCNA_02112	0.85	-1.6
2,262,410	+		CCNA_02112	0.87	-1.0
2,262,457	-				-0.5
2,262,462	-				-0.1
2,262,472	-				+1.3
2,262,487	-				-0.7
2,262,502	-				-0.3
2,262,516	-				-0.7
2,262,533	+				-1.6
2,262,563	-				+0.0
2,262,567	-				-0.5
2,262,618	-		CCNA_02113	0.10	+1.6
2,262,639	+		CCNA_02113	0.13	-1.1
2,262,678	+		CCNA_02113	0.19	-0.4
2,262,679	+		CCNA_02113	0.19	+1.7
2,262,707	+		CCNA_02113	0.23	-0.2
2,262,754	+		CCNA_02113	0.30	+0.6
2,262,769	+		CCNA_02113	0.33	+0.0
2,262,770	-		CCNA_02113	0.33	+0.7
2,262,799	+		CCNA_02113	0.37	-1.8
2,262,799	+		CCNA_02113	0.37	+0.4
2,262,799	+		CCNA_02113	0.37	+0.0
2,262,799	+		CCNA_02113	0.37	-1.0
2,262,801	+		CCNA_02113	0.37	-1.0
2,262,807	-		CCNA_02113	0.38	+0.0
2,262,807	-		CCNA_02113	0.38	-1.0
2,262,807	-		CCNA_02113	0.38	-0.5
2,262,807	-		CCNA_02113	0.38	-0.5
2,262,807	-		CCNA_02113	0.38	+0.0
2,262,822	+		CCNA_02113	0.41	+0.7
2,262,822	+		CCNA_02113	0.41	+1.3
2,262,822	+		CCNA_02113	0.41	-1.4
2,262,822	+		CCNA_02113	0.41	+0.1
2,262,822	+		CCNA_02113	0.41	-1.6
2,262,822	+		CCNA_02113	0.41	-0.1
2,262,822	+		CCNA_02113	0.41	-0.5
2,262,822	+		CCNA_02113	0.41	+0.0
2,262,830	-		CCNA_02113	0.42	+1.3
2,262,830	-		CCNA_02113	0.42	+2.3
2,262,830	-		CCNA_02113	0.42	-1.6
2,262,847	+		CCNA_02113	0.44	+0.3
2,262,988	+		CCNA_02113	0.65	-1.9
2,262,994	+		CCNA_02113	0.66	-1.1
2,263,051	-		CCNA_02113	0.75	+0.3
2,263,087	-		CCNA_02113	0.80	-1.0
2,263,172	+				-1.6
2,263,202	-				+0.0
2,263,222	+				-0.5
2,263,236	+				+0.5
2,263,236	+				+2.3
2,263,237	+				-0.7
2,263,237	+				+0.9
2,263,244	-				-0.2
2,263,244	-				-0.2
2,263,247	+				-0.5
2,263,255	-				+0.8
2,263,309	-				-0.7
2,263,309	-				-1.4
2,263,314	+				-2.2
2,263,324	-				-0.5
2,263,349	+				+1.3
2,263,423	+		CCNA_02114	0.49	-2.3
2,263,423	+		CCNA_02114	0.49	-1.2
2,263,431	-		CCNA_02114	0.54	+0.0
2,263,500	+				-2.9
2,263,517	+				+0.3
2,263,524	+				+1.3
2,263,525	-				+2.3
2,263,538	+				-1.8