Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02065

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,215,501	-				+0.1
2,215,521	+				+1.0
2,215,550	+				+0.2
2,215,558	-				+1.9
2,215,558	-				+2.1
2,215,558	-				+2.0
2,215,687	+				-2.2
2,215,705	+				+0.2
2,215,718	+				-2.5
2,215,728	+				+0.3
2,215,728	+				-0.9
2,215,728	+				-0.8
2,215,728	+				-1.5
2,215,728	+				+1.7
2,215,728	+				+0.5
2,215,728	+				-0.3
2,215,736	-				+0.2
2,215,743	+				-0.6
2,215,749	+				-1.0
2,215,819	-				-3.5
2,215,836	-				-0.9
2,215,836	-				-1.8
2,215,836	-				+1.0
2,215,868	-				+0.2
2,215,899	+				-0.0
2,215,899	+				-1.4
2,215,899	+				-0.7
2,215,899	+				-1.3
2,215,902	-				-0.9
2,215,907	-				-1.9
2,215,907	-				-0.3
2,215,913	-				-0.3
2,215,918	-				-1.5
2,215,945	+				-0.7
2,215,957	+				-1.6
2,215,957	+				-1.5
2,215,957	+				+0.2
2,215,957	+				-1.4
2,215,957	+				+0.5
2,215,959	+				-0.6
2,215,965	-				-1.4
2,215,967	-				-0.5
2,215,988	-				+0.7
2,215,995	+		CCNA_02065	0.10	-0.0
2,216,025	+		CCNA_02065	0.12	-1.0
2,216,036	+		CCNA_02065	0.12	-1.9
2,216,049	-		CCNA_02065	0.13	-1.4
2,216,059	-		CCNA_02065	0.13	+0.2
2,216,133	-		CCNA_02065	0.17	-0.6
2,216,138	+		CCNA_02065	0.17	+0.8
2,216,151	-		CCNA_02065	0.18	+0.2
2,216,164	-		CCNA_02065	0.18	-0.5
2,216,192	+		CCNA_02065	0.20	-1.5
2,216,195	-		CCNA_02065	0.20	-0.9
2,216,200	-		CCNA_02065	0.20	-1.5
2,216,200	-		CCNA_02065	0.20	-1.6
2,216,215	+		CCNA_02065	0.21	-0.6
2,216,243	-		CCNA_02065	0.22	+2.2
2,216,248	+		CCNA_02065	0.22	+1.5
2,216,255	-		CCNA_02065	0.23	+1.3
2,216,268	-		CCNA_02065	0.23	-1.7
2,216,276	+		CCNA_02065	0.24	-0.3
2,216,284	-		CCNA_02065	0.24	-1.5
2,216,284	-		CCNA_02065	0.24	+1.4
2,216,294	-		CCNA_02065	0.24	-0.6
2,216,299	-		CCNA_02065	0.25	-2.3
2,216,318	-		CCNA_02065	0.26	-2.5
2,216,363	-		CCNA_02065	0.28	+1.4
2,216,381	-		CCNA_02065	0.29	+0.2
2,216,439	+		CCNA_02065	0.31	-0.0
2,216,453	-		CCNA_02065	0.32	-1.4
2,216,457	+		CCNA_02065	0.32	+0.8
2,216,490	+		CCNA_02065	0.34	+2.5
2,216,503	+		CCNA_02065	0.34	-1.5
2,216,503	+		CCNA_02065	0.34	-1.3
2,216,509	+		CCNA_02065	0.35	+1.5
2,216,511	+		CCNA_02065	0.35	+1.0
2,216,546	+		CCNA_02065	0.36	-1.6
2,216,562	-		CCNA_02065	0.37	-2.3
2,216,574	-		CCNA_02065	0.38	-0.0
2,216,574	-		CCNA_02065	0.38	-0.8
2,216,615	+		CCNA_02065	0.40	+0.7
2,216,623	-		CCNA_02065	0.40	-0.3
2,216,626	+		CCNA_02065	0.40	-2.7
2,216,653	+		CCNA_02065	0.42	-0.9
2,216,653	+		CCNA_02065	0.42	+0.7
2,216,661	-		CCNA_02065	0.42	-0.9
2,216,693	-		CCNA_02065	0.43	-1.1
2,216,744	+		CCNA_02065	0.46	-0.7
2,216,752	-		CCNA_02065	0.46	-0.5
2,216,821	+		CCNA_02065	0.50	-1.0
2,216,865	-		CCNA_02065	0.52	+0.2
2,216,917	+		CCNA_02065	0.54	-0.6
2,216,917	+		CCNA_02065	0.54	-2.2
2,216,918	-		CCNA_02065	0.54	+1.0
2,216,918	-		CCNA_02065	0.54	-0.0
2,216,918	-		CCNA_02065	0.54	+1.5
2,216,926	+		CCNA_02065	0.54	-0.5
2,216,999	+		CCNA_02065	0.58	+2.5
2,217,048	-		CCNA_02065	0.60	+0.5
2,217,066	+		CCNA_02065	0.61	+0.3
2,217,089	+		CCNA_02065	0.62	+0.5
2,217,089	+		CCNA_02065	0.62	+1.1
2,217,097	+		CCNA_02065	0.63	+0.9
2,217,097	-		CCNA_02065	0.63	+1.0
2,217,097	-		CCNA_02065	0.63	-0.6
2,217,104	+		CCNA_02065	0.63	-2.1
2,217,104	+		CCNA_02065	0.63	+0.6
2,217,138	-		CCNA_02065	0.65	+1.0
2,217,138	-		CCNA_02065	0.65	+0.5
2,217,145	-		CCNA_02065	0.65	+4.7
2,217,174	+		CCNA_02065	0.66	-0.3
2,217,195	+		CCNA_02065	0.67	+1.3
2,217,228	+		CCNA_02065	0.69	+0.3
2,217,229	+		CCNA_02065	0.69	+0.2
2,217,250	+		CCNA_02065	0.70	+1.3
2,217,250	+		CCNA_02065	0.70	+1.2
2,217,255	+				+1.0
2,217,255	+		CCNA_02065	0.70	+1.4
2,217,256	+		CCNA_02065	0.70	-2.5
2,217,263	-		CCNA_02065	0.71	-0.3
2,217,264	-		CCNA_02065	0.71	+0.2
2,217,311	+		CCNA_02065	0.73	+1.1
2,217,319	-		CCNA_02065	0.73	-0.3
2,217,321	+		CCNA_02065	0.73	-0.9
2,217,321	+		CCNA_02065	0.73	-0.6
2,217,353	-		CCNA_02065	0.75	-0.3
2,217,381	+		CCNA_02065	0.76	+0.1
2,217,381	-		CCNA_02065	0.76	-0.8
2,217,382	+		CCNA_02065	0.76	-0.0
2,217,424	+		CCNA_02065	0.78	-3.0
2,217,518	-		CCNA_02065	0.83	-1.9
2,217,534	-		CCNA_02065	0.83	+1.0
2,217,546	+		CCNA_02065	0.84	+3.1
2,217,562	-		CCNA_02065	0.85	+1.5
2,217,570	-		CCNA_02065	0.85	+1.5
2,217,614	-		CCNA_02065	0.87	-0.0
2,217,624	-		CCNA_02065	0.88	+1.5
2,217,627	+		CCNA_02065	0.88	+1.0
2,217,633	-		CCNA_02065	0.88	-0.5
2,217,635	-		CCNA_02065	0.88	-0.5
2,217,638	+		CCNA_02065	0.88	-0.6
2,217,657	+		CCNA_02065	0.89	-0.2
2,217,662	+		CCNA_02065	0.89	+0.3
2,217,662	+		CCNA_02065	0.89	-0.5
2,217,709	+				-0.2
2,217,726	+				+2.9
2,217,763	+				+1.0
2,217,771	-				-0.6
2,217,771	-				-0.3
2,217,793	+				+0.2
2,217,802	+				+1.1
2,217,802	+				+1.7
2,217,802	+				+0.8
2,217,832	+				+1.3
2,217,850	-				-0.5
2,217,993	+				-0.0
2,218,023	-				-2.0
2,218,155	-		CCNA_02066	0.19	+2.3
2,218,168	+		CCNA_02066	0.21	+0.2
2,218,168	+		CCNA_02066	0.21	+0.5
2,218,176	-		CCNA_02066	0.22	+1.8
2,218,176	-		CCNA_02066	0.22	+1.8
2,218,176	-		CCNA_02066	0.22	+2.4
2,218,180	+		CCNA_02066	0.23	+0.5
2,218,215	+		CCNA_02066	0.28	+1.9
2,218,223	-		CCNA_02066	0.29	+2.1
2,218,224	-		CCNA_02066	0.29	+2.2
2,218,295	-		CCNA_02066	0.39	+1.4
2,218,295	-				+4.1
2,218,402	+		CCNA_02066	0.54	+1.4
2,218,448	-		CCNA_02066	0.60	+2.5
2,218,470	+		CCNA_02066	0.63	+1.1
2,218,483	+		CCNA_02066	0.65	+1.2
2,218,726	+				+1.0
2,218,771	+				+2.5
2,218,771	+				-0.3
2,218,779	-				+3.8
2,218,807	-				+2.6
2,218,825	+				+2.3
2,218,858	+				-0.6
2,218,863	-				+2.6
2,218,866	-				+2.5