Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01911

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
2,054,580	+		CCNA_01909	0.54	-0.2
2,054,648	+		CCNA_01909	0.61	-0.2
2,054,680	+		CCNA_01909	0.63	-1.2
2,054,683	-		CCNA_01909	0.64	-0.9
2,054,699	-		CCNA_01909	0.65	-0.8
2,054,763	+		CCNA_01909	0.71	+1.1
2,054,779	+		CCNA_01909	0.72	+0.3
2,054,792	-		CCNA_01909	0.74	+0.6
2,054,810	-		CCNA_01909	0.75	-1.3
2,054,856	-		CCNA_01909	0.79	-1.1
2,054,889	+		CCNA_01909	0.82	-0.8
2,054,917	-		CCNA_01909	0.85	+0.3
2,054,941	+		CCNA_01909	0.87	-0.2
2,054,941	+		CCNA_01909	0.87	+1.1
2,054,954	-		CCNA_01909	0.88	+0.1
2,055,012	-				-2.3
2,055,012	-				-1.1
2,055,013	-				+2.6
2,055,023	-				-0.2
2,055,028	-				+0.1
2,055,034	-				-1.4
2,055,034	-				-1.9
2,055,044	-				+0.3
2,055,044	-				+1.6
2,055,050	-				+0.1
2,055,073	+				-1.2
2,055,073	+				-1.4
2,055,181	-				-0.9
2,055,181	-				-2.0
2,055,266	-				-1.7
2,055,287	-				-0.2
2,055,310	+				+2.1
2,055,310	+				-0.7
2,055,318	-				-0.4
2,055,344	+		CCNA_01910	0.31	-0.2
2,055,347	-		CCNA_01910	0.33	+0.1
2,055,357	+		CCNA_01910	0.42	+0.6
2,055,362	+		CCNA_01910	0.46	-0.4
2,055,370	-		CCNA_01910	0.53	+0.6
2,055,388	-		CCNA_01910	0.68	+1.6
2,055,421	-				+1.6
2,055,440	-				+1.6
2,055,450	-				-1.1
2,055,450	-				-1.8
2,055,450	-				+2.6
2,055,487	+				+1.6
2,055,494	+				+0.1
2,055,502	-				-0.7
2,055,502	-				+0.6
2,055,582	+				+0.6
2,055,590	-				-0.3
2,055,604	+		CCNA_01911	0.11	+0.3
2,055,625	+		CCNA_01911	0.17	+0.1
2,055,633	+		CCNA_01911	0.19	+1.1
2,055,658	-		CCNA_01911	0.26	+0.1
2,055,658	-		CCNA_01911	0.26	+0.1
2,055,682	-		CCNA_01911	0.32	-0.7
2,055,691	-		CCNA_01911	0.35	-1.8
2,055,719	-		CCNA_01911	0.42	-1.1
2,055,734	+		CCNA_01911	0.46	+1.6
2,055,734	+		CCNA_01911	0.46	-0.2
2,055,734	+		CCNA_01911	0.46	+0.1
2,055,742	-		CCNA_01911	0.48	+0.1
2,055,746	+		CCNA_01911	0.49	+0.3
2,055,754	-		CCNA_01911	0.52	-1.4
2,055,766	-		CCNA_01911	0.55	-0.9
2,055,766	-		CCNA_01911	0.55	-0.7
2,055,773	+		CCNA_01911	0.57	+1.1
2,055,773	+		CCNA_01911	0.57	+0.6
2,055,780	+		CCNA_01911	0.59	-0.5
2,055,781	-		CCNA_01911	0.59	-0.7
2,055,785	+		CCNA_01911	0.60	-0.4
2,055,785	+		CCNA_01911	0.60	-2.3
2,055,840	+		CCNA_01911	0.75	+0.1
2,055,840	+		CCNA_01911	0.75	+2.6
2,055,894	-		CCNA_01911	0.89	+1.6
2,055,944	-				+1.1
2,055,949	-				+2.6
2,055,961	+				+0.3
2,055,971	-				-0.8
2,055,977	+				+0.6
2,055,992	-				-0.8
2,056,011	-				+0.1
2,056,011	-				+0.6
2,056,028	-				+2.6
2,056,040	+				+0.1
2,056,040	+				+0.3
2,056,040	+				-0.4
2,056,048	-				-0.8
2,056,050	+				-0.7
2,056,050	+				-1.2
2,056,053	-				-0.7
2,056,097	-				+1.1
2,056,109	-				-1.6
2,056,126	+				-0.4
2,056,134	-				+0.1
2,056,134	-				-1.2
2,056,134	-				-1.2
2,056,134	-				-1.5
2,056,136	+				+1.6
2,056,136	+				+0.3
2,056,136	+				+0.6
2,056,151	+				+1.1
2,056,218	-		CCNA_01912	0.28	-0.5
2,056,225	+		CCNA_01912	0.30	+2.6
2,056,330	-		CCNA_01912	0.63	+1.6
2,056,331	-		CCNA_01912	0.63	+2.6
2,056,341	+		CCNA_01912	0.66	+0.3
2,056,344	-		CCNA_01912	0.67	-0.9
2,056,349	-		CCNA_01912	0.69	-1.3
2,056,362	-		CCNA_01912	0.73	+0.1
2,056,364	-		CCNA_01912	0.73	+1.1
2,056,376	+		CCNA_01912	0.77	-0.5
2,056,376	+		CCNA_01912	0.77	-0.4
2,056,390	+		CCNA_01912	0.81	-0.5
2,056,390	+		CCNA_01912	0.81	+3.5
2,056,390	+		CCNA_01912	0.81	+1.1
2,056,398	-		CCNA_01912	0.84	-0.8
2,056,500	-				-1.2
2,056,559	+				+2.1
2,056,560	+				+1.7
2,056,567	-				-0.8
2,056,638	+		CCNA_01913	0.25	+1.8
2,056,643	+		CCNA_01913	0.27	+2.4
2,056,662	+		CCNA_01913	0.31	+3.9
2,056,679	+		CCNA_01913	0.36	+2.8
2,056,706	+		CCNA_01913	0.43	+2.7
2,056,708	+		CCNA_01913	0.44	+3.2
2,056,708	+		CCNA_01913	0.44	+3.5
2,056,709	-		CCNA_01913	0.44	+1.1
2,056,733	+		CCNA_01913	0.50	+2.3
2,056,733	+		CCNA_01913	0.50	+2.2
2,056,759	+		CCNA_01913	0.57	+4.2
2,056,759	+		CCNA_01913	0.57	+3.0
2,056,797	+		CCNA_01913	0.67	+3.1
2,056,797	+		CCNA_01913	0.67	+3.2
2,056,797	+		CCNA_01913	0.67	+3.1
2,056,800	-		CCNA_01913	0.68	+0.3
2,056,811	+		CCNA_01913	0.71	+3.2
2,056,821	+		CCNA_01913	0.73	+3.7
2,056,831	+		CCNA_01913	0.76	+3.1
2,056,839	-		CCNA_01913	0.78	+1.6
2,056,839	-		CCNA_01913	0.78	+1.1
2,056,856	+		CCNA_01913	0.82	+2.9
2,056,856	+		CCNA_01913	0.82	+3.1
2,056,856	+		CCNA_01913	0.82	+2.9
2,056,856	+		CCNA_01913	0.82	+3.6
2,056,856	+		CCNA_01913	0.82	+3.3
2,056,864	-		CCNA_01913	0.85	+1.1
2,056,864	-		CCNA_01913	0.85	-0.7
2,056,895	-				+0.3