Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01851

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
1,981,729	-		CCNA_01850	0.51	+2.3
1,981,730	-		CCNA_01850	0.51	+2.1
1,981,730	-		CCNA_01850	0.51	+3.4
1,981,737	-		CCNA_01850	0.52	+2.4
1,981,737	-		CCNA_01850	0.52	+2.0
1,981,830	+		CCNA_01850	0.56	+0.2
1,981,922	-		CCNA_01850	0.61	+2.6
1,981,937	+		CCNA_01850	0.62	-1.3
1,981,961	+		CCNA_01850	0.63	+0.4
1,981,994	-		CCNA_01850	0.65	+3.1
1,981,994	-		CCNA_01850	0.65	+2.5
1,981,994	-		CCNA_01850	0.65	+2.8
1,982,023	-		CCNA_01850	0.66	+2.7
1,982,036	-		CCNA_01850	0.67	+3.1
1,982,064	+		CCNA_01850	0.68	+1.2
1,982,072	-		CCNA_01850	0.68	+2.7
1,982,072	-		CCNA_01850	0.68	+3.2
1,982,072	-		CCNA_01850	0.68	+2.7
1,982,190	+		CCNA_01850	0.74	+0.2
1,982,198	-		CCNA_01850	0.75	+1.6
1,982,210	+		CCNA_01850	0.75	+2.8
1,982,223	-		CCNA_01850	0.76	+3.2
1,982,250	-		CCNA_01850	0.77	+2.9
1,982,324	-		CCNA_01850	0.81	+3.9
1,982,353	-		CCNA_01850	0.83	+3.9
1,982,358	-		CCNA_01850	0.83	+3.0
1,982,380	-		CCNA_01850	0.84	+2.6
1,982,380	-		CCNA_01850	0.84	+2.7
1,982,429	-		CCNA_01850	0.86	+3.3
1,982,496	-		CCNA_01850	0.90	+3.1
1,982,497	+		CCNA_01850	0.90	+1.2
1,982,501	-		CCNA_01850	0.90	+2.6
1,982,523	+				+1.2
1,982,568	-				+3.4
1,982,580	+				+0.8
1,982,595	-				+2.8
1,982,597	+				-0.1
1,982,605	-				+3.8
1,982,611	+				+1.2
1,982,629	+				-0.1
1,982,637	-				+2.1
1,982,637	-				+2.6
1,982,707	-				+3.1
1,982,746	-				+2.8
1,982,820	-				+3.2
1,982,820	-				+3.2
1,982,820	-				+2.8
1,982,853	-		CCNA_01851	0.13	+3.7
1,982,864	-		CCNA_01851	0.14	+3.0
1,982,887	-		CCNA_01851	0.16	+2.8
1,982,899	-		CCNA_01851	0.17	+3.7
1,982,910	-		CCNA_01851	0.18	+3.4
1,982,910	-		CCNA_01851	0.18	+3.9
1,982,938	-		CCNA_01851	0.21	+2.8
1,982,943	-		CCNA_01851	0.21	+3.4
1,982,943	-		CCNA_01851	0.21	+3.3
1,982,943	-		CCNA_01851	0.21	+3.4
1,982,965	-		CCNA_01851	0.23	+3.6
1,982,965	-		CCNA_01851	0.23	+3.6
1,982,965	-		CCNA_01851	0.23	+3.4
1,982,965	-		CCNA_01851	0.23	+3.5
1,982,970	-		CCNA_01851	0.24	+3.3
1,983,053	-		CCNA_01851	0.31	+3.3
1,983,105	-		CCNA_01851	0.36	+3.8
1,983,119	-		CCNA_01851	0.38	+3.5
1,983,119	-		CCNA_01851	0.38	+3.5
1,983,160	-		CCNA_01851	0.41	+3.1
1,983,187	+		CCNA_01851	0.44	+1.8
1,983,192	+		CCNA_01851	0.44	+1.2
1,983,200	-		CCNA_01851	0.45	+3.6
1,983,200	-		CCNA_01851	0.45	+3.5
1,983,200	-		CCNA_01851	0.45	+4.5
1,983,200	-		CCNA_01851	0.45	+3.5
1,983,200	-		CCNA_01851	0.45	+3.4
1,983,200	-		CCNA_01851	0.45	+3.4
1,983,200	-		CCNA_01851	0.45	+3.4
1,983,200	-		CCNA_01851	0.45	+2.8
1,983,200	-		CCNA_01851	0.45	+3.1
1,983,268	-		CCNA_01851	0.52	+3.4
1,983,308	+		CCNA_01851	0.55	+0.4
1,983,424	+		CCNA_01851	0.66	+1.8
1,983,431	-		CCNA_01851	0.67	+3.3
1,983,441	-		CCNA_01851	0.68	+3.3
1,983,451	-		CCNA_01851	0.69	+3.3
1,983,476	+		CCNA_01851	0.71	+0.4
1,983,510	-		CCNA_01851	0.74	+2.0
1,983,581	-		CCNA_01851	0.81	+3.6
1,983,592	-		CCNA_01851	0.82	+2.4
1,983,625	-		CCNA_01851	0.85	+2.9
1,983,660	-		CCNA_01851	0.89	+2.2
1,983,757	+				-2.0
1,983,780	-				+2.4
1,983,826	+				-0.4
1,983,838	-				-0.2
1,983,844	-				-0.1
1,983,850	+				+2.2
1,983,880	+				-0.2
1,983,978	+				+0.4
1,983,978	+				+0.2
1,983,983	+				+0.2
1,983,986	-				-0.4
1,983,991	-				+1.2
1,984,012	+				+1.2
1,984,012	+				-0.7
1,984,012	+				+0.4
1,984,020	-				+1.4
1,984,025	+				+2.8
1,984,056	+				-0.4
1,984,060	+				-0.1
1,984,060	+				+1.2
1,984,075	-				-1.2
1,984,154	+		CCNA_01852	0.12	-0.1
1,984,154	+				+0.2
1,984,159	+		CCNA_01852	0.12	-1.1
1,984,203	+		CCNA_01852	0.16	+1.3
1,984,203	+		CCNA_01852	0.16	-0.7
1,984,211	-		CCNA_01852	0.16	+2.8
1,984,215	+		CCNA_01852	0.17	-2.9
1,984,215	+		CCNA_01852	0.17	+0.4
1,984,215	+		CCNA_01852	0.17	+0.5
1,984,215	+		CCNA_01852	0.17	+1.2
1,984,223	-		CCNA_01852	0.17	+2.8
1,984,223	-		CCNA_01852	0.17	-1.4
1,984,223	-		CCNA_01852	0.17	+0.2
1,984,223	-		CCNA_01852	0.17	-0.8
1,984,262	+		CCNA_01852	0.20	-1.1
1,984,283	-				+1.8
1,984,285	+		CCNA_01852	0.22	+0.1
1,984,293	-		CCNA_01852	0.22	+0.4
1,984,293	-		CCNA_01852	0.22	+0.4
1,984,299	+		CCNA_01852	0.23	-0.8
1,984,299	+		CCNA_01852	0.23	-0.7
1,984,307	-		CCNA_01852	0.23	+0.9
1,984,311	+		CCNA_01852	0.24	-0.1
1,984,314	-		CCNA_01852	0.24	-0.1
1,984,343	+		CCNA_01852	0.26	-0.2
1,984,360	+		CCNA_01852	0.27	-0.7
1,984,380	+		CCNA_01852	0.29	-1.6
1,984,424	+		CCNA_01852	0.32	+0.4
1,984,427	-		CCNA_01852	0.32	+0.4
1,984,432	-		CCNA_01852	0.33	-0.4
1,984,451	+		CCNA_01852	0.34	-0.2
1,984,451	+		CCNA_01852	0.34	-0.4
1,984,486	+		CCNA_01852	0.37	+2.0
1,984,607	+		CCNA_01852	0.46	+0.2
1,984,690	+		CCNA_01852	0.52	+0.4
1,984,766	+		CCNA_01852	0.58	-2.5