Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01817

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
1,942,593	+		CCNA_01816	0.57	+0.4
1,942,659	+		CCNA_01816	0.60	+0.1
1,942,801	+		CCNA_01816	0.66	+1.9
1,942,812	+		CCNA_01816	0.67	+0.8
1,942,827	+		CCNA_01816	0.68	-0.2
1,942,879	+		CCNA_01816	0.70	+0.5
1,942,892	-		CCNA_01816	0.70	-1.1
1,943,085	+		CCNA_01816	0.79	+4.1
1,943,115	+		CCNA_01816	0.80	+0.4
1,943,125	+		CCNA_01816	0.81	+2.2
1,943,142	-		CCNA_01816	0.82	+1.2
1,943,187	+		CCNA_01816	0.84	+2.0
1,943,274	+		CCNA_01816	0.87	+1.6
1,943,279	+		CCNA_01816	0.88	+0.8
1,943,300	+		CCNA_01816	0.89	+1.5
1,943,310	+		CCNA_01816	0.89	+1.8
1,943,323	+		CCNA_01816	0.90	+0.4
1,943,323	+		CCNA_01816	0.90	+0.9
1,943,331	-				-0.2
1,943,366	+				-0.1
1,943,395	+				+1.6
1,943,397	-				-0.3
1,943,397	-				-0.2
1,943,397	-				-0.5
1,943,397	-				-0.8
1,943,402	-				+0.5
1,943,403	-				+0.5
1,943,403	-				+0.1
1,943,408	-				+2.2
1,943,450	-				+1.2
1,943,511	+				+2.5
1,943,526	+				+1.2
1,943,526	+				+1.0
1,943,534	-				+1.8
1,943,536	+				+0.7
1,943,546	+				+1.0
1,943,626	+				-0.9
1,943,626	+				-1.9
1,943,626	+				-1.2
1,943,626	+				-1.9
1,943,644	-				+0.2
1,943,645	+				-0.1
1,943,739	+		CCNA_01817	0.13	-2.0
1,943,739	+		CCNA_01817	0.13	-2.4
1,943,739	+		CCNA_01817	0.13	-2.3
1,943,739	+		CCNA_01817	0.13	+2.2
1,943,739	+		CCNA_01817	0.13	-0.5
1,943,739	+		CCNA_01817	0.13	-1.0
1,943,739	+		CCNA_01817	0.13	-1.3
1,943,739	+		CCNA_01817	0.13	-2.9
1,943,747	-		CCNA_01817	0.14	-0.3
1,943,747	-		CCNA_01817	0.14	+0.5
1,943,747	-		CCNA_01817	0.14	+1.8
1,943,758	+		CCNA_01817	0.15	-1.8
1,943,758	+		CCNA_01817	0.15	-2.4
1,943,759	+		CCNA_01817	0.15	-2.0
1,943,766	-		CCNA_01817	0.15	+1.8
1,943,795	+		CCNA_01817	0.17	-2.7
1,943,801	+		CCNA_01817	0.18	-2.0
1,943,847	+		CCNA_01817	0.21	-2.5
1,943,907	+		CCNA_01817	0.26	-2.2
1,944,052	+		CCNA_01817	0.36	-1.1
1,944,122	+		CCNA_01817	0.41	-1.5
1,944,122	+		CCNA_01817	0.41	-1.5
1,944,219	+		CCNA_01817	0.48	-2.1
1,944,323	-		CCNA_01817	0.56	+1.8
1,944,356	+		CCNA_01817	0.58	+1.8
1,944,437	+		CCNA_01817	0.64	-0.9
1,944,448	+		CCNA_01817	0.65	+0.2
1,944,471	+		CCNA_01817	0.66	+0.0
1,944,501	+		CCNA_01817	0.68	-1.0
1,944,590	+		CCNA_01817	0.75	-0.3
1,944,626	+		CCNA_01817	0.77	-1.6
1,944,705	+		CCNA_01817	0.83	+0.8
1,944,723	-		CCNA_01817	0.84	+0.2
1,944,723	-		CCNA_01817	0.84	+0.8
1,944,762	+		CCNA_01817	0.87	+2.8
1,944,818	+				-0.5
1,944,818	+				-0.6
1,944,818	+				+0.8
1,944,849	+				-1.6
1,944,878	+				+0.2
1,944,995	-				-0.1
1,945,032	+		CCNA_01818	0.11	+1.4
1,945,115	-		CCNA_01818	0.20	-0.1
1,945,115	-		CCNA_01818	0.20	-0.3
1,945,120	+		CCNA_01818	0.21	+2.8
1,945,173	-		CCNA_01818	0.27	-0.6
1,945,194	+		CCNA_01818	0.29	+1.2
1,945,277	+		CCNA_01818	0.39	+0.1
1,945,280	-		CCNA_01818	0.39	+0.8
1,945,296	+		CCNA_01818	0.41	+1.1
1,945,318	+		CCNA_01818	0.44	-0.5
1,945,318	+		CCNA_01818	0.44	+1.8
1,945,326	-		CCNA_01818	0.45	+1.2
1,945,336	-		CCNA_01818	0.46	+0.2
1,945,347	+		CCNA_01818	0.47	-1.1
1,945,422	-		CCNA_01818	0.56	+0.8
1,945,467	+		CCNA_01818	0.61	+1.1
1,945,467	+		CCNA_01818	0.61	+1.6
1,945,475	-		CCNA_01818	0.62	-0.3
1,945,482	+		CCNA_01818	0.63	+2.6
1,945,488	-		CCNA_01818	0.63	+0.5
1,945,517	+		CCNA_01818	0.67	+1.3
1,945,575	+		CCNA_01818	0.73	+0.7
1,945,583	-		CCNA_01818	0.74	+1.0
1,945,585	+		CCNA_01818	0.75	+0.9
1,945,627	+		CCNA_01818	0.79	+0.8
1,945,664	-		CCNA_01818	0.84	-0.5
1,945,696	-		CCNA_01818	0.87	+0.8
1,945,769	+				+0.8
1,945,769	+				+3.2
1,945,789	+				+2.3
1,945,898	+				+2.8
1,945,923	+				+2.2