Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01813

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
1,937,642	+				-1.6
1,937,660	-				+0.3
1,937,748	+				+0.3
1,937,756	-				+0.0
1,937,765	+				-0.7
1,937,774	+				-0.3
1,937,787	-				+1.3
1,937,816	+		CCNA_01813	0.11	+0.5
1,937,817	+		CCNA_01813	0.11	+1.2
1,937,875	-		CCNA_01813	0.17	+1.3
1,937,953	+		CCNA_01813	0.25	+3.2
1,937,965	+		CCNA_01813	0.26	+2.6
1,937,999	+		CCNA_01813	0.29	+1.1
1,938,037	+		CCNA_01813	0.33	+1.9
1,938,043	+		CCNA_01813	0.34	+4.6
1,938,055	+		CCNA_01813	0.35	+2.7
1,938,055	+		CCNA_01813	0.35	+3.2
1,938,063	+		CCNA_01813	0.36	+0.0
1,938,063	-		CCNA_01813	0.36	+0.8
1,938,068	+		CCNA_01813	0.36	+2.7
1,938,088	+		CCNA_01813	0.38	+1.5
1,938,151	+		CCNA_01813	0.44	+2.8
1,938,170	+		CCNA_01813	0.46	+3.5
1,938,210	+		CCNA_01813	0.50	+0.9
1,938,212	-		CCNA_01813	0.50	+1.8
1,938,220	+		CCNA_01813	0.51	+2.7
1,938,220	+		CCNA_01813	0.51	+3.3
1,938,220	+		CCNA_01813	0.51	+3.0
1,938,220	+				+3.6
1,938,220	+		CCNA_01813	0.51	+2.8
1,938,220	+		CCNA_01813	0.51	+1.9
1,938,222	+		CCNA_01813	0.51	-0.6
1,938,228	-		CCNA_01813	0.52	+0.8
1,938,246	+		CCNA_01813	0.54	+0.3
1,938,291	+		CCNA_01813	0.58	-0.3
1,938,299	-		CCNA_01813	0.59	-0.3
1,938,361	-		CCNA_01813	0.65	+1.3
1,938,363	+		CCNA_01813	0.65	+2.4
1,938,389	+		CCNA_01813	0.68	+2.8
1,938,397	+		CCNA_01813	0.69	+2.0
1,938,397	+		CCNA_01813	0.69	+1.3
1,938,489	+		CCNA_01813	0.78	+0.4
1,938,527	-		CCNA_01813	0.82	+0.5
1,938,547	-		CCNA_01813	0.84	-0.6
1,938,585	+		CCNA_01813	0.87	+3.0
1,938,622	-				-0.6
1,938,622	-				+0.8
1,938,622	-				-1.9
1,938,628	+				+2.1
1,938,663	-				+0.8
1,938,710	-				+1.3
1,938,721	+				+3.5
1,938,758	-				+1.2
1,938,765	+				+2.0
1,938,779	+				+1.4
1,938,867	+		CCNA_01814	0.14	+3.7
1,938,889	+		CCNA_01814	0.16	+3.8
1,938,912	+		CCNA_01814	0.18	+3.5
1,938,924	+		CCNA_01814	0.19	+3.7
1,938,941	+		CCNA_01814	0.21	+3.4
1,938,977	+		CCNA_01814	0.24	-1.1
1,939,085	+		CCNA_01814	0.34	+2.8
1,939,139	+		CCNA_01814	0.38	+3.1
1,939,166	-		CCNA_01814	0.41	-1.3
1,939,210	+		CCNA_01814	0.45	+3.5
1,939,215	+		CCNA_01814	0.45	+3.4
1,939,298	+		CCNA_01814	0.53	+3.2
1,939,298	+		CCNA_01814	0.53	+3.2
1,939,298	+		CCNA_01814	0.53	+3.2
1,939,298	+		CCNA_01814	0.53	+3.3
1,939,298	+		CCNA_01814	0.53	+3.7
1,939,316	-		CCNA_01814	0.54	+1.7
1,939,369	-		CCNA_01814	0.59	+0.8
1,939,381	+		CCNA_01814	0.60	+3.6
1,939,398	+		CCNA_01814	0.61	+3.4
1,939,400	+		CCNA_01814	0.62	+3.9
1,939,422	+		CCNA_01814	0.64	+3.9
1,939,441	+		CCNA_01814	0.65	+2.6
1,939,454	-		CCNA_01814	0.66	+1.2
1,939,456	+		CCNA_01814	0.67	+3.3
1,939,515	+		CCNA_01814	0.72	+3.3
1,939,554	+		CCNA_01814	0.75	+3.2
1,939,684	+		CCNA_01814	0.87	+3.5
1,939,689	+		CCNA_01814	0.87	+3.7
1,939,697	-		CCNA_01814	0.88	+0.5
1,939,697	-		CCNA_01814	0.88	+0.0