Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01721

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
1,847,589	+		CCNA_01718	0.73	-1.5
1,847,601	+				+1.8
1,847,601	+		CCNA_01718	0.76	+0.5
1,847,601	+		CCNA_01718	0.76	+0.8
1,847,606	+		CCNA_01718	0.77	-0.1
1,847,612	+		CCNA_01718	0.78	+1.7
1,847,614	-		CCNA_01718	0.78	-1.4
1,847,614	-		CCNA_01718	0.78	-0.6
1,847,616	+		CCNA_01718	0.79	-0.5
1,847,629	+		CCNA_01718	0.81	+0.3
1,847,629	+		CCNA_01718	0.81	-0.7
1,847,651	+		CCNA_01718	0.85	-0.3
1,847,651	+		CCNA_01718	0.85	+2.0
1,847,651	+		CCNA_01718	0.85	-1.7
1,847,651	+		CCNA_01718	0.85	+2.8
1,847,651	+		CCNA_01718	0.85	+2.1
1,847,651	+		CCNA_01718	0.85	+1.8
1,847,651	+		CCNA_01718	0.85	+0.3
1,847,651	+		CCNA_01718	0.85	+0.5
1,847,651	+		CCNA_01718	0.85	+4.4
1,847,651	+		CCNA_01718	0.85	+1.8
1,847,651	+		CCNA_01718	0.85	+0.6
1,847,659	-		CCNA_01718	0.87	+0.0
1,847,659	-		CCNA_01718	0.87	+3.2
1,847,659	-		CCNA_01718	0.87	-0.6
1,847,659	-		CCNA_01718	0.87	-1.2
1,847,659	-		CCNA_01718	0.87	+0.9
1,847,659	-		CCNA_01718	0.87	-0.3
1,847,659	-		CCNA_01718	0.87	+2.8
1,847,659	-		CCNA_01718	0.87	-0.5
1,847,659	-		CCNA_01718	0.87	+0.8
1,847,705	+				+1.1
1,847,713	-				-2.2
1,847,739	+				+0.2
1,847,787	+		CCNA_01719	0.21	+1.0
1,847,858	+				+3.4
1,847,881	+		CCNA_01719	0.51	+2.5
1,848,025	+				+0.0
1,848,083	+				+3.4
1,848,083	+				+1.7
1,848,189	-		CCNA_03893	0.14	+2.8
1,848,268	+		CCNA_03893	0.34	+2.7
1,848,292	+		CCNA_03893	0.40	+5.3
1,848,323	+		CCNA_03893	0.48	+1.3
1,848,331	-		CCNA_03893	0.50	-1.0
1,848,386	+		CCNA_03893	0.64	+4.0
1,848,461	+		CCNA_03893	0.83	+3.4
1,848,495	+				+2.5
1,848,495	+				+3.0
1,848,520	+				+4.3
1,848,520	+				+4.5
1,848,536	+				+6.1
1,848,537	+				+4.9
1,848,589	+				-1.0
1,848,597	-				+2.8
1,848,614	-		CCNA_01721	0.11	+2.8
1,848,629	+		CCNA_01721	0.14	-2.5
1,848,666	+		CCNA_01721	0.20	+1.0
1,848,674	-		CCNA_01721	0.21	-0.3
1,848,675	-		CCNA_01721	0.22	+1.8
1,848,731	+		CCNA_01721	0.31	+0.4
1,848,812	+		CCNA_01721	0.45	+2.8
1,848,812	+		CCNA_01721	0.45	+1.8
1,848,820	-		CCNA_01721	0.46	+2.3
1,848,820	-		CCNA_01721	0.46	+0.5
1,848,827	+		CCNA_01721	0.48	+0.3
1,848,881	-		CCNA_01721	0.57	+0.5
1,848,936	+		CCNA_01721	0.66	-1.3
1,848,936	+		CCNA_01721	0.66	+1.6
1,848,988	+		CCNA_01721	0.75	+1.7
1,849,044	+		CCNA_01721	0.85	+1.3
1,849,052	-		CCNA_01721	0.86	-1.0
1,849,122	+				+0.0
1,849,122	+				+0.7
1,849,122	+				-0.6
1,849,122	+				-0.5
1,849,130	-				-0.2
1,849,198	+				+1.3
1,849,200	+		CCNA_01722	0.24	-0.1
1,849,277	+		CCNA_01722	0.43	+1.1
1,849,282	+		CCNA_01722	0.44	+5.3
1,849,282	+		CCNA_01722	0.44	+5.4
1,849,520	+				-1.9