Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01608

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
1,726,563	-				+1.8
1,726,581	+				-1.6
1,726,581	+				+1.2
1,726,581	+				-0.8
1,726,581	+				+2.8
1,726,581	+				+0.2
1,726,624	+				-1.1
1,726,643	+				+1.8
1,726,643	+				-0.8
1,726,680	+				-1.6
1,726,680	+				-0.5
1,726,866	-		CCNA_01607	0.12	+0.8
1,726,866	-		CCNA_01607	0.12	+0.8
1,727,011	+		CCNA_01607	0.32	+1.2
1,727,455	+				+0.6
1,727,489	+				+0.0
1,727,494	+				+0.0
1,727,502	-				+1.8
1,727,512	+				+1.2
1,727,515	-				+1.8
1,727,546	+		CCNA_01608	0.12	-2.1
1,727,554	-		CCNA_01608	0.13	+3.0
1,727,618	-		CCNA_01608	0.23	+2.5
1,727,625	+		CCNA_01608	0.24	+0.5
1,727,627	+		CCNA_01608	0.24	-1.4
1,727,627	+		CCNA_01608	0.24	+1.2
1,727,634	+		CCNA_01608	0.25	-0.9
1,727,634	+		CCNA_01608	0.25	+2.4
1,727,635	-				+2.4
1,727,635	-		CCNA_01608	0.25	+1.8
1,727,635	-		CCNA_01608	0.25	+2.2
1,727,667	-		CCNA_01608	0.30	+2.2
1,727,678	-		CCNA_01608	0.32	+2.5
1,727,713	-		CCNA_01608	0.37	+2.5
1,727,829	+		CCNA_01608	0.54	+2.8
1,727,837	-		CCNA_01608	0.55	+1.9
1,727,896	-		CCNA_01608	0.64	+2.5
1,727,918	-		CCNA_01608	0.67	+2.3
1,727,918	-		CCNA_01608	0.67	+2.5
1,727,919	-		CCNA_01608	0.68	+4.3
1,727,929	+		CCNA_01608	0.69	-0.2
1,727,929	+		CCNA_01608	0.69	-0.3
1,727,930	+		CCNA_01608	0.69	-0.2
1,727,944	+		CCNA_01608	0.71	-0.3
1,727,951	-		CCNA_01608	0.72	+2.6
1,727,964	+		CCNA_01608	0.74	-1.8
1,728,026	-		CCNA_01608	0.83	+2.1
1,728,041	+		CCNA_01608	0.86	-1.3
1,728,093	+				+2.8
1,728,095	+				+2.8
1,728,208	+				-0.9
1,728,252	-				+1.0
1,728,294	-				+0.2
1,728,298	+				-0.2
1,728,298	+				+0.8
1,728,298	+				-0.3
1,728,306	-				+0.4
1,728,306	-				+0.2
1,728,351	-				-1.6
1,728,411	-		CCNA_01609	0.11	+2.8
1,728,411	-		CCNA_01609	0.11	-0.5
1,728,418	+		CCNA_01609	0.12	-0.8
1,728,418	+		CCNA_01609	0.12	+0.8
1,728,426	-		CCNA_01609	0.12	+0.5
1,728,429	+		CCNA_01609	0.12	-1.5
1,728,437	-		CCNA_01609	0.13	-0.6
1,728,489	+		CCNA_01609	0.15	+0.5
1,728,497	-		CCNA_01609	0.16	+1.2
1,728,497	-		CCNA_01609	0.16	+0.2
1,728,508	-		CCNA_01609	0.16	+0.0
1,728,512	-		CCNA_01609	0.17	+2.8
1,728,519	-		CCNA_01609	0.17	-0.2
1,728,580	+		CCNA_01609	0.20	+1.3
1,728,637	-		CCNA_01609	0.23	+2.6
1,728,637	-		CCNA_01609	0.23	+2.8
1,728,647	-		CCNA_01609	0.24	+0.2
1,728,678	+		CCNA_01609	0.25	-1.8
1,728,678	+		CCNA_01609	0.25	-1.6
1,728,678	+		CCNA_01609	0.25	+1.7
1,728,679	-		CCNA_01609	0.25	+2.7
1,728,680	+		CCNA_01609	0.25	-1.0
1,728,686	-		CCNA_01609	0.26	+0.8
1,728,686	-		CCNA_01609	0.26	-1.1
1,728,686	-		CCNA_01609	0.26	-0.1
1,728,686	-		CCNA_01609	0.26	+2.8
1,728,686	-		CCNA_01609	0.26	+0.2
1,728,705	+		CCNA_01609	0.26	-0.5
1,728,823	+		CCNA_01609	0.33	+0.2
1,728,888	-		CCNA_01609	0.36	+1.2
1,728,888	-		CCNA_01609	0.36	+0.5
1,728,901	+		CCNA_01609	0.37	+0.0
1,728,909	-		CCNA_01609	0.37	+2.8
1,728,946	+		CCNA_01609	0.39	-0.2
1,728,973	-		CCNA_01609	0.40	+0.5
1,728,986	+		CCNA_01609	0.41	+0.2
1,728,988	+		CCNA_01609	0.41	+1.8
1,728,989	-		CCNA_01609	0.41	+0.5
1,729,042	-		CCNA_01609	0.44	-0.3
1,729,057	-		CCNA_01609	0.44	-2.0
1,729,068	+		CCNA_01609	0.45	-1.3
1,729,121	+		CCNA_01609	0.48	-1.0