Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01462

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
1,568,373	+		CCNA_01459	0.72	+0.9
1,568,394	-		CCNA_01459	0.80	+3.5
1,568,440	+				-0.5
1,568,448	-				-1.2
1,568,448	-				-0.4
1,568,448	-				+0.1
1,568,448	-				+1.1
1,568,482	+				-1.1
1,568,500	-				+3.9
1,568,500	-				+3.4
1,568,504	-				-1.7
1,568,572	-		CCNA_01460	0.25	+0.4
1,568,574	-		CCNA_01460	0.26	+0.2
1,568,574	-		CCNA_01460	0.26	+1.2
1,568,606	-		CCNA_01460	0.40	+1.2
1,568,617	+		CCNA_01460	0.45	-0.7
1,568,637	-		CCNA_01460	0.54	+0.2
1,568,663	+		CCNA_01460	0.66	-0.8
1,568,666	-		CCNA_01460	0.68	-0.1
1,568,671	-		CCNA_01460	0.70	-0.2
1,568,681	-		CCNA_01460	0.74	-0.9
1,568,681	-		CCNA_01460	0.74	+1.3
1,568,682	-		CCNA_01460	0.75	-0.8
1,568,749	+				-1.6
1,568,831	+		CCNA_01461	0.22	-0.2
1,568,831	+		CCNA_01461	0.22	-0.2
1,568,842	+		CCNA_01461	0.25	-0.7
1,568,850	-		CCNA_01461	0.28	+1.2
1,568,856	-		CCNA_01461	0.30	-0.7
1,568,907	+		CCNA_01461	0.47	+1.8
1,568,907	+		CCNA_01461	0.47	+1.8
1,568,907	+		CCNA_01461	0.47	-1.8
1,568,907	+		CCNA_01461	0.47	+0.4
1,568,907	+		CCNA_01461	0.47	+1.8
1,568,907	+		CCNA_01461	0.47	+0.8
1,568,907	+		CCNA_01461	0.47	-0.4
1,568,915	-		CCNA_01461	0.49	+0.1
1,568,915	-		CCNA_01461	0.49	-0.7
1,568,915	-		CCNA_01461	0.49	-1.1
1,568,915	-		CCNA_01461	0.49	+0.6
1,568,915	-		CCNA_01461	0.49	-1.7
1,568,915	-		CCNA_01461	0.49	+1.8
1,568,915	-		CCNA_01461	0.49	-0.2
1,568,915	-		CCNA_01461	0.49	+0.4
1,568,940	+		CCNA_01461	0.58	+2.8
1,568,948	-		CCNA_01461	0.60	-0.1
1,568,952	+		CCNA_01461	0.61	+1.8
1,569,007	+				+1.2
1,569,015	-		CCNA_01461	0.82	-0.9
1,569,021	+		CCNA_01461	0.84	-0.2
1,569,030	-		CCNA_01461	0.87	-1.2
1,569,031	+				+3.8
1,569,055	+				+4.3
1,569,063	-				-1.9
1,569,063	-				-0.4
1,569,086	+				+0.4
1,569,096	+				+0.2
1,569,104	-				-0.9
1,569,129	-				-0.8
1,569,177	-				-0.7
1,569,199	-				-0.6
1,569,281	+				+0.2
1,569,299	+				+1.3
1,569,367	+				-1.1
1,569,448	+		CCNA_01462	0.13	+0.2
1,569,448	+		CCNA_01462	0.13	+0.4
1,569,448	+		CCNA_01462	0.13	+0.8
1,569,448	-		CCNA_01462	0.13	-0.9
1,569,448	-		CCNA_01462	0.13	+0.4
1,569,456	-		CCNA_01462	0.14	-1.6
1,569,456	-		CCNA_01462	0.14	+0.8
1,569,470	-		CCNA_01462	0.15	-0.4
1,569,481	+		CCNA_01462	0.16	-0.0
1,569,502	-		CCNA_01462	0.18	-0.2
1,569,603	+		CCNA_01462	0.26	-0.0
1,569,611	-		CCNA_01462	0.27	-0.7
1,569,625	+		CCNA_01462	0.28	-0.5
1,569,625	+		CCNA_01462	0.28	-1.0
1,569,650	+				+1.2
1,569,658	-		CCNA_01462	0.31	-0.4
1,569,681	+		CCNA_01462	0.33	-0.0
1,569,727	-		CCNA_01462	0.37	+0.6
1,569,737	-		CCNA_01462	0.38	-1.4
1,569,744	+				+2.8
1,569,744	+		CCNA_01462	0.38	-0.8
1,569,752	-		CCNA_01462	0.39	-0.7
1,569,752	-		CCNA_01462	0.39	-1.3
1,569,752	-		CCNA_01462	0.39	-0.9
1,569,808	+		CCNA_01462	0.44	-1.1
1,569,822	-		CCNA_01462	0.45	+0.6
1,569,867	-		CCNA_01462	0.49	-0.8
1,569,873	-		CCNA_01462	0.49	-0.9
1,569,913	+		CCNA_01462	0.53	-0.0
1,569,924	+		CCNA_01462	0.54	+1.2
1,569,932	-		CCNA_01462	0.54	+1.0
1,569,948	+		CCNA_01462	0.56	-2.5
1,569,954	-		CCNA_01462	0.56	-0.4
1,569,983	-		CCNA_01462	0.59	-0.9
1,570,038	+		CCNA_01462	0.63	-1.1
1,570,087	-		CCNA_01462	0.67	-1.9
1,570,087	-		CCNA_01462	0.67	-1.5
1,570,166	-		CCNA_01462	0.74	-0.8
1,570,180	+		CCNA_01462	0.75	+1.2
1,570,202	+		CCNA_01462	0.77	-0.6
1,570,202	+		CCNA_01462	0.77	+0.8
1,570,234	+		CCNA_01462	0.80	-0.0
1,570,312	-		CCNA_01462	0.87	+1.4
1,570,312	-		CCNA_01462	0.87	+0.6
1,570,338	+		CCNA_01462	0.89	+0.6
1,570,339	-		CCNA_01462	0.89	-0.9
1,570,344	-		CCNA_01462	0.89	-2.0
1,570,346	+		CCNA_01462	0.89	-0.1
1,570,346	+		CCNA_01462	0.89	+0.4
1,570,354	-				-1.5
1,570,384	+				-0.6
1,570,456	-				-1.3
1,570,470	+				+0.5
1,570,520	-				-0.0
1,570,529	+				+1.0
1,570,604	-				+0.4
1,570,618	-				+1.4
1,570,686	-				-1.5
1,570,686	-				-0.1
1,570,758	+				-1.6
1,570,758	+				-0.9
1,570,766	+				-0.2
1,570,788	-		CCNA_01463	0.11	-0.2
1,570,792	+		CCNA_01463	0.11	-0.7
1,570,793	+		CCNA_01463	0.11	-0.0
1,570,795	-		CCNA_01463	0.12	+0.6
1,570,795	-		CCNA_01463	0.12	+1.1
1,570,814	-		CCNA_01463	0.13	-0.5
1,570,858	-		CCNA_01463	0.17	+0.7
1,570,884	-		CCNA_01463	0.20	-0.4
1,570,980	-		CCNA_01463	0.28	-0.6
1,570,990	-		CCNA_01463	0.29	-0.6
1,571,024	+		CCNA_01463	0.32	+0.8
1,571,052	+		CCNA_01463	0.35	-1.0
1,571,064	+		CCNA_01463	0.36	+0.2
1,571,064	+		CCNA_01463	0.36	-0.0
1,571,074	+		CCNA_01463	0.37	-2.2
1,571,099	-		CCNA_01463	0.39	-0.5
1,571,112	+		CCNA_01463	0.40	-2.0
1,571,199	+		CCNA_01463	0.48	+0.4
1,571,212	-		CCNA_01463	0.49	+0.2
1,571,217	-		CCNA_01463	0.50	-0.9
1,571,283	+		CCNA_01463	0.55	+1.2
1,571,283	+		CCNA_01463	0.55	+1.2
1,571,286	-		CCNA_01463	0.56	+0.5
1,571,288	+		CCNA_01463	0.56	+0.2
1,571,291	-		CCNA_01463	0.56	+1.3
1,571,328	+		CCNA_01463	0.60	+2.8
1,571,341	-		CCNA_01463	0.61	+1.0
1,571,377	+				+2.8
1,571,428	-		CCNA_01463	0.69	+1.0
1,571,430	+		CCNA_01463	0.69	+0.2
1,571,435	+		CCNA_01463	0.69	-0.0