Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01447

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
1,558,573	+		CCNA_01446	0.27	+0.4
1,558,576	-		CCNA_01446	0.27	-0.6
1,558,584	+		CCNA_01446	0.28	-0.0
1,558,587	-		CCNA_01446	0.28	-0.3
1,558,588	+		CCNA_01446	0.28	+2.1
1,558,618	-		CCNA_01446	0.30	-1.0
1,558,620	+		CCNA_01446	0.31	+2.0
1,558,623	-		CCNA_01446	0.31	-0.3
1,558,694	+		CCNA_01446	0.37	-0.3
1,558,704	+		CCNA_01446	0.38	+0.3
1,558,723	+		CCNA_01446	0.39	+1.5
1,558,731	-		CCNA_01446	0.40	-0.3
1,558,731	-		CCNA_01446	0.40	+0.7
1,558,761	+		CCNA_01446	0.42	+1.9
1,558,763	-		CCNA_01446	0.42	-0.9
1,558,790	+		CCNA_01446	0.45	-0.5
1,558,795	+		CCNA_01446	0.45	+0.4
1,558,849	-		CCNA_01446	0.49	+0.4
1,558,922	+		CCNA_01446	0.55	+0.9
1,558,956	+		CCNA_01446	0.58	+3.5
1,558,956	+		CCNA_01446	0.58	+0.9
1,558,956	+		CCNA_01446	0.58	+0.1
1,558,956	+		CCNA_01446	0.58	+0.9
1,558,956	+		CCNA_01446	0.58	-1.0
1,558,965	-		CCNA_01446	0.59	+1.1
1,559,013	+		CCNA_01446	0.63	+1.3
1,559,016	-		CCNA_01446	0.63	-1.0
1,559,021	-		CCNA_01446	0.63	-0.5
1,559,021	-		CCNA_01446	0.63	+0.1
1,559,040	+		CCNA_01446	0.65	-0.5
1,559,048	-		CCNA_01446	0.66	+1.7
1,559,061	+		CCNA_01446	0.67	+0.4
1,559,092	+		CCNA_01446	0.69	-0.2
1,559,092	+		CCNA_01446	0.69	-1.3
1,559,100	-		CCNA_01446	0.70	-0.6
1,559,100	-		CCNA_01446	0.70	+0.4
1,559,100	-		CCNA_01446	0.70	+0.7
1,559,102	+		CCNA_01446	0.70	+1.7
1,559,110	-		CCNA_01446	0.71	+0.4
1,559,112	-		CCNA_01446	0.71	-0.3
1,559,114	+		CCNA_01446	0.71	+0.9
1,559,142	-		CCNA_01446	0.73	+1.7
1,559,160	+		CCNA_01446	0.75	+1.8
1,559,160	+		CCNA_01446	0.75	+1.9
1,559,182	+		CCNA_01446	0.77	+0.5
1,559,190	-		CCNA_01446	0.77	-0.6
1,559,190	-		CCNA_01446	0.77	+0.7
1,559,190	-		CCNA_01446	0.77	+0.4
1,559,206	+		CCNA_01446	0.79	+0.8
1,559,206	+		CCNA_01446	0.79	-0.1
1,559,212	+		CCNA_01446	0.79	+0.9
1,559,222	+		CCNA_01446	0.80	+2.9
1,559,255	+		CCNA_01446	0.83	+0.8
1,559,260	+		CCNA_01446	0.83	+1.3
1,559,301	-		CCNA_01446	0.86	-2.2
1,559,318	+		CCNA_01446	0.88	+0.9
1,559,331	-		CCNA_01446	0.89	-0.7
1,559,338	+		CCNA_01446	0.89	+1.7
1,559,339	+		CCNA_01446	0.90	-1.5
1,559,354	+				+0.4
1,559,358	+				+0.2
1,559,358	+				+2.1
1,559,366	-				+1.1
1,559,366	-				+1.7
1,559,371	-				+0.1
1,559,375	+				+1.9
1,559,386	+				+2.4
1,559,428	+				+1.6
1,559,433	+				+2.4
1,559,439	+				+2.5
1,559,441	-				-2.0
1,559,450	+				+2.3
1,559,450	+				+1.8
1,559,455	+				+2.4
1,559,460	+				+2.4
1,559,460	+				+1.3
1,559,460	+				+1.7
1,559,460	+				+3.1
1,559,463	-				+1.7
1,559,468	-				+0.4
1,559,468	-				+1.4
1,559,468	-				+2.7
1,559,468	-				-0.5
1,559,474	+				+2.4
1,559,474	+				+0.9
1,559,576	-				+1.1
1,559,626	+				+2.5
1,559,659	+		CCNA_01447	0.12	+1.1
1,559,739	+		CCNA_01447	0.18	+2.1
1,559,739	+		CCNA_01447	0.18	+1.9
1,559,760	+		CCNA_01447	0.20	+2.0
1,559,773	+		CCNA_01447	0.21	+2.2
1,559,859	+		CCNA_01447	0.28	+2.4
1,559,884	-		CCNA_01447	0.30	-1.2
1,559,886	+		CCNA_01447	0.30	+1.9
1,560,052	+		CCNA_01447	0.43	-0.7
1,560,052	+		CCNA_01447	0.43	+1.9
1,560,058	+		CCNA_01447	0.43	+4.0
1,560,058	+		CCNA_01447	0.43	-0.7
1,560,058	+		CCNA_01447	0.43	+1.7
1,560,058	+		CCNA_01447	0.43	+2.5
1,560,060	-		CCNA_01447	0.43	+0.7
1,560,060	-		CCNA_01447	0.43	-0.6
1,560,060	-		CCNA_01447	0.43	+0.4
1,560,063	+		CCNA_01447	0.43	+0.2
1,560,066	-		CCNA_01447	0.44	+1.1
1,560,066	-		CCNA_01447	0.44	+2.7
1,560,067	-		CCNA_01447	0.44	+0.1
1,560,194	+		CCNA_01447	0.54	+0.0
1,560,209	+		CCNA_01447	0.55	+1.4
1,560,219	+		CCNA_01447	0.56	+1.6
1,560,266	+		CCNA_01447	0.59	+1.3
1,560,267	+		CCNA_01447	0.59	+0.4
1,560,406	-		CCNA_01447	0.70	-0.1
1,560,415	+		CCNA_01447	0.71	+0.5
1,560,459	+		CCNA_01447	0.74	+1.2
1,560,459	+		CCNA_01447	0.74	+0.6
1,560,459	+		CCNA_01447	0.74	+0.7
1,560,459	+		CCNA_01447	0.74	+0.9
1,560,510	-		CCNA_01447	0.78	+0.4
1,560,536	-		CCNA_01447	0.80	+1.4
1,560,536	-		CCNA_01447	0.80	+2.2
1,560,548	-		CCNA_01447	0.81	+2.7
1,560,565	+		CCNA_01447	0.82	+3.3
1,560,605	+		CCNA_01447	0.85	+1.8
1,560,660	+		CCNA_01447	0.90	+0.4
1,560,828	+				+3.5
1,560,838	+				+1.3
1,560,956	-				-0.1
1,561,087	-		CCNA_01448	0.23	+0.4
1,561,180	-		CCNA_01448	0.33	+0.7
1,561,202	+		CCNA_01448	0.35	+0.7
1,561,215	+		CCNA_01448	0.36	-0.4
1,561,242	-		CCNA_01448	0.39	-0.1
1,561,328	+		CCNA_01448	0.48	-0.5
1,561,336	-		CCNA_01448	0.49	-0.3
1,561,336	-		CCNA_01448	0.49	+1.1
1,561,353	+		CCNA_01448	0.51	-0.6
1,561,413	+		CCNA_01448	0.57	-2.0
1,561,468	-		CCNA_01448	0.63	+1.7
1,561,481	-		CCNA_01448	0.64	+0.7
1,561,486	+		CCNA_01448	0.65	+2.8
1,561,493	+		CCNA_01448	0.66	+3.5
1,561,527	+		CCNA_01448	0.69	+1.4
1,561,527	+		CCNA_01448	0.69	+2.7
1,561,527	+		CCNA_01448	0.69	+0.9
1,561,535	-		CCNA_01448	0.70	+1.7
1,561,540	-		CCNA_01448	0.71	-0.3
1,561,663	-		CCNA_01448	0.83	+0.1
1,561,751	+				-1.6
1,561,753	+				+1.9
1,561,761	-				-0.1
1,561,761	-				+1.7
1,561,788	+				+0.6