Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01435

Experiment: PYE with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Polymyxin B sulfate 0.005 mg/ml
1,548,518	-				-0.1
1,548,570	+				+1.0
1,548,575	+				+0.5
1,548,575	+				+0.0
1,548,575	+				-0.3
1,548,575	+				-0.1
1,548,575	+				+0.6
1,548,575	+				+1.8
1,548,583	-				+1.7
1,548,583	-				+2.7
1,548,585	+				+1.7
1,548,595	+		CCNA_01433	0.11	+1.1
1,548,608	+		CCNA_01433	0.15	+1.2
1,548,629	+		CCNA_01433	0.22	+0.1
1,548,639	+		CCNA_01433	0.25	+1.4
1,548,660	+		CCNA_01433	0.32	+0.1
1,548,660	+		CCNA_01433	0.32	+1.1
1,548,660	+		CCNA_01433	0.32	+1.0
1,548,668	-		CCNA_01433	0.35	+1.1
1,548,668	-		CCNA_01433	0.35	+0.7
1,548,668	-		CCNA_01433	0.35	+1.7
1,548,689	-		CCNA_01433	0.42	+1.1
1,548,699	+		CCNA_01433	0.45	-0.1
1,548,699	-		CCNA_01433	0.45	+1.7
1,548,888	+				+3.2
1,549,037	+		CCNA_01434	0.37	+1.9
1,549,037	+		CCNA_01434	0.37	+1.4
1,549,058	+		CCNA_01434	0.42	+1.1
1,549,061	-		CCNA_01434	0.43	+0.1
1,549,068	+		CCNA_01434	0.45	+1.7
1,549,068	+		CCNA_01434	0.45	-1.1
1,549,068	+		CCNA_01434	0.45	+1.1
1,549,076	-		CCNA_01434	0.46	-1.0
1,549,076	-		CCNA_01434	0.46	+1.7
1,549,076	-		CCNA_01434	0.46	-0.7
1,549,089	-		CCNA_01434	0.50	-1.5
1,549,175	+		CCNA_01434	0.70	+1.5
1,549,183	-		CCNA_01434	0.72	-1.4
1,549,254	+		CCNA_01434	0.88	+2.5
1,549,262	-				-1.2
1,549,286	+				+1.6
1,549,299	+				+1.1
1,549,309	+				+2.5
1,549,458	+				+2.5
1,549,521	+				+0.7
1,549,527	-				+1.3
1,549,543	-		CCNA_01435	0.13	+0.4
1,549,577	+		CCNA_01435	0.27	+1.6
1,549,587	-		CCNA_01435	0.31	+0.9
1,549,592	-		CCNA_01435	0.33	+0.0
1,549,611	-		CCNA_01435	0.40	+0.7
1,549,626	+		CCNA_01435	0.46	-1.4
1,549,626	+		CCNA_01435	0.46	+1.7
1,549,626	+		CCNA_01435	0.46	+1.1
1,549,634	-		CCNA_01435	0.50	+1.8
1,549,634	-		CCNA_01435	0.50	+1.0
1,549,643	+		CCNA_01435	0.53	-0.6
1,549,661	-		CCNA_01435	0.60	+0.8
1,549,661	-		CCNA_01435	0.60	+2.0
1,549,668	-		CCNA_01435	0.63	-0.4
1,549,669	+		CCNA_01435	0.63	+1.1
1,549,683	-		CCNA_01435	0.69	+1.4
1,549,693	-		CCNA_01435	0.73	+0.7
1,549,693	-		CCNA_01435	0.73	+0.8
1,549,693	-		CCNA_01435	0.73	+1.6
1,549,721	-		CCNA_01435	0.84	-1.1
1,549,736	-				+0.4
1,549,766	+				+1.1
1,549,771	+				-0.2
1,549,777	+				+0.8
1,549,806	-		CCNA_01437	0.19	+2.0
1,549,841	+		CCNA_01437	0.33	-1.1
1,549,868	+		CCNA_01437	0.44	+1.2
1,549,868	+		CCNA_01437	0.44	-1.1
1,549,883	-		CCNA_01437	0.50	-0.4
1,549,899	-		CCNA_01437	0.56	+2.3
1,549,909	-		CCNA_01437	0.60	+1.2
1,549,921	+		CCNA_01437	0.65	-0.1
1,549,923	+		CCNA_01437	0.66	+1.8
1,549,993	+				-0.4
1,550,050	+				+2.2
1,550,069	-				+1.2
1,550,069	-				-0.4
1,550,325	+		CCNA_01438	0.16	-1.0
1,550,325	+		CCNA_01438	0.16	+0.7
1,550,325	+		CCNA_01438	0.16	-0.3
1,550,325	+		CCNA_01438	0.16	+1.0
1,550,325	+		CCNA_01438	0.16	+1.1
1,550,325	+		CCNA_01438	0.16	-0.7
1,550,333	-		CCNA_01438	0.17	+0.7
1,550,333	-		CCNA_01438	0.17	+0.1
1,550,349	+		CCNA_01438	0.18	-0.1
1,550,349	+		CCNA_01438	0.18	-0.4
1,550,357	-		CCNA_01438	0.19	+1.1
1,550,380	-		CCNA_01438	0.21	+0.1
1,550,474	+		CCNA_01438	0.31	-0.8
1,550,557	-		CCNA_01438	0.39	+1.7
1,550,574	+		CCNA_01438	0.40	+0.7
1,550,575	-		CCNA_01438	0.40	+1.7
1,550,590	+		CCNA_01438	0.42	-1.2
1,550,617	+		CCNA_01438	0.44	+0.2
1,550,625	-		CCNA_01438	0.45	+0.7
1,550,628	+		CCNA_01438	0.45	+0.4
1,550,650	+		CCNA_01438	0.48	+0.2
1,550,694	+		CCNA_01438	0.52	-0.7
1,550,731	+		CCNA_01438	0.55	-0.6