Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS28325 and AZOBR_RS28330 are separated by 269 nucleotides AZOBR_RS28330 and AZOBR_RS28335 are separated by 202 nucleotides
AZOBR_RS28325: AZOBR_RS28325 - DEAD/DEAH box helicase, at 525,362 to 527,164
_RS28325
AZOBR_RS28330: AZOBR_RS28330 - potassium channel protein, at 527,434 to 528,516
_RS28330
AZOBR_RS28335: AZOBR_RS28335 - hypothetical protein, at 528,719 to 530,371
_RS28335
Position (kb) 527
528
529 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 526.664 kb on + strand, within AZOBR_RS28325 at 526.664 kb on + strand, within AZOBR_RS28325 at 526.664 kb on + strand, within AZOBR_RS28325 at 526.664 kb on + strand, within AZOBR_RS28325 at 526.664 kb on + strand, within AZOBR_RS28325 at 526.665 kb on - strand, within AZOBR_RS28325 at 526.665 kb on - strand, within AZOBR_RS28325 at 526.665 kb on - strand, within AZOBR_RS28325 at 526.670 kb on + strand, within AZOBR_RS28325 at 526.857 kb on - strand, within AZOBR_RS28325 at 526.857 kb on - strand, within AZOBR_RS28325 at 526.949 kb on + strand, within AZOBR_RS28325 at 527.772 kb on - strand, within AZOBR_RS28330 at 527.772 kb on - strand, within AZOBR_RS28330 at 527.868 kb on + strand, within AZOBR_RS28330 at 527.868 kb on + strand, within AZOBR_RS28330 at 527.869 kb on - strand, within AZOBR_RS28330 at 528.241 kb on + strand, within AZOBR_RS28330 at 528.242 kb on - strand, within AZOBR_RS28330 at 528.444 kb on + strand at 528.444 kb on + strand at 528.515 kb on - strand at 528.619 kb on - strand at 528.684 kb on + strand at 528.684 kb on + strand at 528.684 kb on + strand at 528.684 kb on + strand at 528.756 kb on + strand at 529.168 kb on - strand, within AZOBR_RS28335 at 529.168 kb on - strand, within AZOBR_RS28335 at 529.168 kb on - strand, within AZOBR_RS28335 at 529.168 kb on - strand, within AZOBR_RS28335
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 526,664 + AZOBR_RS28325 0.72 -0.1 526,664 + AZOBR_RS28325 0.72 +0.7 526,664 + AZOBR_RS28325 0.72 -2.2 526,664 + AZOBR_RS28325 0.72 -1.1 526,664 + AZOBR_RS28325 0.72 -0.3 526,665 - AZOBR_RS28325 0.72 +0.1 526,665 - AZOBR_RS28325 0.72 +0.5 526,665 - AZOBR_RS28325 0.72 +2.1 526,670 + AZOBR_RS28325 0.73 -0.5 526,857 - AZOBR_RS28325 0.83 +0.2 526,857 - AZOBR_RS28325 0.83 +1.1 526,949 + AZOBR_RS28325 0.88 -1.5 527,772 - AZOBR_RS28330 0.31 -1.1 527,772 - AZOBR_RS28330 0.31 -0.3 527,868 + AZOBR_RS28330 0.40 -2.3 527,868 + AZOBR_RS28330 0.40 -0.1 527,869 - AZOBR_RS28330 0.40 +0.5 528,241 + AZOBR_RS28330 0.75 -0.6 528,242 - AZOBR_RS28330 0.75 -2.9 528,444 + -2.3 528,444 + +0.1 528,515 - +0.7 528,619 - -5.4 528,684 + -0.2 528,684 + -2.9 528,684 + +1.5 528,684 + -0.1 528,756 + -0.0 529,168 - AZOBR_RS28335 0.27 +0.9 529,168 - AZOBR_RS28335 0.27 +0.8 529,168 - AZOBR_RS28335 0.27 -3.5 529,168 - AZOBR_RS28335 0.27 -0.1
Or see this region's nucleotide sequence