Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27630 and AZOBR_RS27635 overlap by 1 nucleotides AZOBR_RS27635 and AZOBR_RS27640 are separated by 66 nucleotides
AZOBR_RS27630: AZOBR_RS27630 - CoA-transferase, at 361,198 to 362,391
_RS27630
AZOBR_RS27635: AZOBR_RS27635 - enoyl-CoA hydratase, at 362,391 to 363,212
_RS27635
AZOBR_RS27640: AZOBR_RS27640 - ABC transporter substrate-binding protein, at 363,279 to 364,250
_RS27640
Position (kb) 362
363
364 Strain fitness (log2 ratio) -2
-1
0
1
2 at 361.894 kb on + strand, within AZOBR_RS27630 at 362.152 kb on + strand, within AZOBR_RS27630 at 362.153 kb on - strand, within AZOBR_RS27630 at 362.153 kb on - strand, within AZOBR_RS27630 at 363.013 kb on - strand, within AZOBR_RS27635 at 363.013 kb on - strand, within AZOBR_RS27635 at 363.013 kb on - strand, within AZOBR_RS27635 at 363.210 kb on + strand at 363.211 kb on - strand at 363.246 kb on + strand at 363.246 kb on + strand at 363.246 kb on + strand at 363.247 kb on - strand at 363.391 kb on - strand, within AZOBR_RS27640 at 363.391 kb on - strand, within AZOBR_RS27640 at 363.618 kb on + strand, within AZOBR_RS27640 at 363.619 kb on - strand, within AZOBR_RS27640 at 363.747 kb on + strand, within AZOBR_RS27640 at 363.748 kb on - strand, within AZOBR_RS27640 at 363.748 kb on - strand, within AZOBR_RS27640 at 363.900 kb on + strand, within AZOBR_RS27640 at 363.901 kb on - strand, within AZOBR_RS27640 at 364.002 kb on + strand, within AZOBR_RS27640 at 364.003 kb on - strand, within AZOBR_RS27640
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 361,894 + AZOBR_RS27630 0.58 -0.5 362,152 + AZOBR_RS27630 0.80 +0.4 362,153 - AZOBR_RS27630 0.80 -1.8 362,153 - AZOBR_RS27630 0.80 -1.2 363,013 - AZOBR_RS27635 0.76 -0.3 363,013 - AZOBR_RS27635 0.76 -0.1 363,013 - AZOBR_RS27635 0.76 +0.1 363,210 + -0.2 363,211 - -0.0 363,246 + +1.0 363,246 + +0.0 363,246 + +0.9 363,247 - -1.8 363,391 - AZOBR_RS27640 0.12 +0.1 363,391 - AZOBR_RS27640 0.12 +0.8 363,618 + AZOBR_RS27640 0.35 -0.3 363,619 - AZOBR_RS27640 0.35 +1.8 363,747 + AZOBR_RS27640 0.48 +0.4 363,748 - AZOBR_RS27640 0.48 +1.3 363,748 - AZOBR_RS27640 0.48 -0.0 363,900 + AZOBR_RS27640 0.64 +0.1 363,901 - AZOBR_RS27640 0.64 -1.2 364,002 + AZOBR_RS27640 0.74 +2.0 364,003 - AZOBR_RS27640 0.74 +0.1
Or see this region's nucleotide sequence