Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27240 and AZOBR_RS27245 are separated by 305 nucleotides AZOBR_RS27245 and AZOBR_RS27250 are separated by 136 nucleotides
AZOBR_RS27240: AZOBR_RS27240 - hypothetical protein, at 253,316 to 255,229
_RS27240
AZOBR_RS27245: AZOBR_RS27245 - hypothetical protein, at 255,535 to 256,176
_RS27245
AZOBR_RS27250: AZOBR_RS27250 - hypothetical protein, at 256,313 to 258,367
_RS27250
Position (kb) 255
256
257 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 254.559 kb on + strand, within AZOBR_RS27240 at 254.559 kb on + strand, within AZOBR_RS27240 at 254.652 kb on + strand, within AZOBR_RS27240 at 254.717 kb on + strand, within AZOBR_RS27240 at 254.717 kb on + strand, within AZOBR_RS27240 at 254.916 kb on + strand, within AZOBR_RS27240 at 254.917 kb on - strand, within AZOBR_RS27240 at 254.917 kb on - strand, within AZOBR_RS27240 at 255.427 kb on - strand at 255.653 kb on + strand, within AZOBR_RS27245 at 256.505 kb on + strand at 256.505 kb on + strand at 256.505 kb on + strand at 256.506 kb on - strand at 256.526 kb on - strand, within AZOBR_RS27250 at 256.527 kb on + strand, within AZOBR_RS27250 at 256.527 kb on + strand, within AZOBR_RS27250 at 256.528 kb on - strand, within AZOBR_RS27250 at 256.528 kb on - strand, within AZOBR_RS27250 at 256.544 kb on + strand, within AZOBR_RS27250 at 256.544 kb on + strand, within AZOBR_RS27250 at 256.544 kb on + strand, within AZOBR_RS27250 at 256.545 kb on - strand, within AZOBR_RS27250 at 257.090 kb on + strand, within AZOBR_RS27250 at 257.090 kb on + strand, within AZOBR_RS27250 at 257.090 kb on + strand, within AZOBR_RS27250 at 257.091 kb on - strand, within AZOBR_RS27250 at 257.091 kb on - strand, within AZOBR_RS27250 at 257.091 kb on - strand, within AZOBR_RS27250
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 254,559 + AZOBR_RS27240 0.65 -1.4 254,559 + AZOBR_RS27240 0.65 -0.3 254,652 + AZOBR_RS27240 0.70 +0.6 254,717 + AZOBR_RS27240 0.73 -3.1 254,717 + AZOBR_RS27240 0.73 -2.1 254,916 + AZOBR_RS27240 0.84 +0.4 254,917 - AZOBR_RS27240 0.84 +0.6 254,917 - AZOBR_RS27240 0.84 -1.0 255,427 - +0.6 255,653 + AZOBR_RS27245 0.18 -1.5 256,505 + +1.6 256,505 + +1.1 256,505 + +1.1 256,506 - +0.1 256,526 - AZOBR_RS27250 0.10 -0.2 256,527 + AZOBR_RS27250 0.10 -2.8 256,527 + AZOBR_RS27250 0.10 +1.2 256,528 - AZOBR_RS27250 0.10 -1.6 256,528 - AZOBR_RS27250 0.10 +1.2 256,544 + AZOBR_RS27250 0.11 +0.6 256,544 + AZOBR_RS27250 0.11 -1.5 256,544 + AZOBR_RS27250 0.11 +1.1 256,545 - AZOBR_RS27250 0.11 +0.1 257,090 + AZOBR_RS27250 0.38 -0.8 257,090 + AZOBR_RS27250 0.38 +0.5 257,090 + AZOBR_RS27250 0.38 +1.6 257,091 - AZOBR_RS27250 0.38 -0.4 257,091 - AZOBR_RS27250 0.38 +1.5 257,091 - AZOBR_RS27250 0.38 -1.6
Or see this region's nucleotide sequence