Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25610 and AZOBR_RS25615 are separated by 926 nucleotides AZOBR_RS25615 and AZOBR_RS25620 are separated by 78 nucleotides AZOBR_RS25620 and AZOBR_RS25625 are separated by 63 nucleotides
AZOBR_RS25610: AZOBR_RS25610 - NADPH-dependent FMN reductase, at 794,194 to 794,784
_RS25610
AZOBR_RS25615: AZOBR_RS25615 - chemotaxis protein, at 795,711 to 797,153
_RS25615
AZOBR_RS25620: AZOBR_RS25620 - 2-amino-thiazoline-4-carboxylic acid hydrolase, at 797,232 to 797,696
_RS25620
AZOBR_RS25625: AZOBR_RS25625 - leucine/isoleucine/valine transporter ATP-binding subunit, at 797,760 to 798,458
_RS25625
Position (kb)
795
796
797
798 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 794.932 kb on + strand at 795.005 kb on - strand at 795.005 kb on - strand at 795.039 kb on - strand at 795.039 kb on - strand at 795.086 kb on - strand at 795.115 kb on + strand at 795.147 kb on - strand at 795.155 kb on + strand at 795.155 kb on + strand at 795.198 kb on - strand at 795.290 kb on - strand at 795.424 kb on - strand at 795.477 kb on + strand at 795.477 kb on + strand at 795.478 kb on - strand at 795.478 kb on - strand at 795.478 kb on - strand at 795.535 kb on - strand at 795.535 kb on - strand at 795.535 kb on - strand at 795.535 kb on - strand at 795.939 kb on + strand, within AZOBR_RS25615 at 795.939 kb on + strand, within AZOBR_RS25615 at 795.940 kb on - strand, within AZOBR_RS25615 at 795.940 kb on - strand, within AZOBR_RS25615 at 796.588 kb on + strand, within AZOBR_RS25615 at 796.589 kb on - strand, within AZOBR_RS25615 at 797.645 kb on - strand, within AZOBR_RS25620 at 797.782 kb on + strand at 797.783 kb on - strand at 797.783 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 794,932 + +1.6 795,005 - -0.5 795,005 - +0.1 795,039 - -0.2 795,039 - -0.2 795,086 - +0.8 795,115 + -0.0 795,147 - -3.2 795,155 + +0.4 795,155 + +0.1 795,198 - +0.2 795,290 - +0.1 795,424 - -0.4 795,477 + -0.1 795,477 + +0.4 795,478 - -0.5 795,478 - +0.3 795,478 - +1.0 795,535 - +0.3 795,535 - -0.6 795,535 - -0.7 795,535 - +0.7 795,939 + AZOBR_RS25615 0.16 -0.4 795,939 + AZOBR_RS25615 0.16 +0.4 795,940 - AZOBR_RS25615 0.16 -0.1 795,940 - AZOBR_RS25615 0.16 +0.7 796,588 + AZOBR_RS25615 0.61 +0.2 796,589 - AZOBR_RS25615 0.61 -0.8 797,645 - AZOBR_RS25620 0.89 +0.7 797,782 + -0.8 797,783 - +0.0 797,783 - +0.6
Or see this region's nucleotide sequence