Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS24070 and AZOBR_RS24075 are separated by 72 nucleotides AZOBR_RS24075 and AZOBR_RS24080 are separated by 116 nucleotides
AZOBR_RS24070: AZOBR_RS24070 - acetyl-CoA hydrolase, at 438,986 to 440,479
_RS24070
AZOBR_RS24075: AZOBR_RS24075 - hypothetical protein, at 440,552 to 440,905
_RS24075
AZOBR_RS24080: AZOBR_RS24080 - methyl-accepting chemotaxis protein, at 441,022 to 442,725
_RS24080
Position (kb) 440
441 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 439.841 kb on + strand, within AZOBR_RS24070 at 439.841 kb on + strand, within AZOBR_RS24070 at 439.841 kb on + strand, within AZOBR_RS24070 at 439.842 kb on - strand, within AZOBR_RS24070 at 439.842 kb on - strand, within AZOBR_RS24070 at 439.842 kb on - strand, within AZOBR_RS24070 at 439.842 kb on - strand, within AZOBR_RS24070 at 439.842 kb on - strand, within AZOBR_RS24070 at 439.937 kb on + strand, within AZOBR_RS24070 at 439.967 kb on + strand, within AZOBR_RS24070 at 439.967 kb on + strand, within AZOBR_RS24070 at 439.967 kb on + strand, within AZOBR_RS24070 at 439.968 kb on - strand, within AZOBR_RS24070 at 439.968 kb on - strand, within AZOBR_RS24070 at 439.968 kb on - strand, within AZOBR_RS24070 at 440.073 kb on - strand, within AZOBR_RS24070 at 440.073 kb on - strand, within AZOBR_RS24070 at 440.073 kb on - strand, within AZOBR_RS24070 at 440.073 kb on - strand, within AZOBR_RS24070 at 440.372 kb on + strand at 440.706 kb on + strand, within AZOBR_RS24075 at 440.707 kb on - strand, within AZOBR_RS24075 at 440.707 kb on - strand, within AZOBR_RS24075 at 440.793 kb on + strand, within AZOBR_RS24075 at 440.941 kb on + strand at 440.941 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 439,841 + AZOBR_RS24070 0.57 -1.9 439,841 + AZOBR_RS24070 0.57 +0.3 439,841 + AZOBR_RS24070 0.57 +0.7 439,842 - AZOBR_RS24070 0.57 +0.7 439,842 - AZOBR_RS24070 0.57 -1.4 439,842 - AZOBR_RS24070 0.57 +0.2 439,842 - AZOBR_RS24070 0.57 -3.4 439,842 - AZOBR_RS24070 0.57 +0.1 439,937 + AZOBR_RS24070 0.64 +0.2 439,967 + AZOBR_RS24070 0.66 -2.5 439,967 + AZOBR_RS24070 0.66 -0.7 439,967 + AZOBR_RS24070 0.66 +0.6 439,968 - AZOBR_RS24070 0.66 -0.7 439,968 - AZOBR_RS24070 0.66 -1.3 439,968 - AZOBR_RS24070 0.66 +0.1 440,073 - AZOBR_RS24070 0.73 -3.1 440,073 - AZOBR_RS24070 0.73 -3.1 440,073 - AZOBR_RS24070 0.73 +1.0 440,073 - AZOBR_RS24070 0.73 +1.7 440,372 + +0.2 440,706 + AZOBR_RS24075 0.44 -0.0 440,707 - AZOBR_RS24075 0.44 -0.3 440,707 - AZOBR_RS24075 0.44 -1.0 440,793 + AZOBR_RS24075 0.68 +1.4 440,941 + +0.1 440,941 + -0.7
Or see this region's nucleotide sequence