Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23760 and AZOBR_RS23765 are separated by 131 nucleotides AZOBR_RS23765 and AZOBR_RS23770 are separated by 152 nucleotides AZOBR_RS23770 and AZOBR_RS23775 overlap by 11 nucleotides AZOBR_RS23775 and AZOBR_RS23780 are separated by 3 nucleotides
AZOBR_RS23760: AZOBR_RS23760 - RND transporter, at 363,398 to 364,447
_RS23760
AZOBR_RS23765: AZOBR_RS23765 - sulfurtransferase, at 364,579 to 364,782
_RS23765
AZOBR_RS23770: AZOBR_RS23770 - hypothetical protein, at 364,935 to 366,740
_RS23770
AZOBR_RS23775: AZOBR_RS23775 - LuxR family transcriptional regulator, at 366,730 to 367,341
_RS23775
AZOBR_RS23780: AZOBR_RS23780 - thioredoxin, at 367,345 to 367,794
_RS23780
Position (kb) 364
365
366
367 Strain fitness (log2 ratio) -2
-1
0
1
2 at 364.817 kb on + strand at 364.817 kb on + strand at 364.825 kb on + strand at 364.825 kb on + strand at 364.825 kb on + strand at 364.825 kb on + strand at 364.825 kb on + strand at 364.826 kb on - strand at 364.826 kb on - strand at 364.826 kb on - strand at 364.826 kb on - strand at 364.826 kb on - strand at 364.826 kb on - strand at 364.826 kb on - strand at 364.826 kb on - strand at 364.998 kb on + strand at 365.163 kb on + strand, within AZOBR_RS23770 at 365.163 kb on + strand, within AZOBR_RS23770 at 365.163 kb on + strand, within AZOBR_RS23770 at 365.163 kb on + strand, within AZOBR_RS23770 at 365.164 kb on - strand, within AZOBR_RS23770 at 365.164 kb on - strand, within AZOBR_RS23770 at 365.164 kb on - strand, within AZOBR_RS23770 at 365.164 kb on - strand, within AZOBR_RS23770 at 365.395 kb on - strand, within AZOBR_RS23770 at 365.742 kb on + strand, within AZOBR_RS23770 at 365.742 kb on + strand, within AZOBR_RS23770 at 365.743 kb on - strand, within AZOBR_RS23770 at 366.102 kb on + strand, within AZOBR_RS23770 at 366.758 kb on - strand at 366.758 kb on - strand at 367.339 kb on + strand at 367.339 kb on + strand at 367.340 kb on - strand at 367.340 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 364,817 + -1.7 364,817 + -0.1 364,825 + +0.7 364,825 + +0.3 364,825 + -2.5 364,825 + -0.9 364,825 + +0.7 364,826 - +0.8 364,826 - +1.1 364,826 - -1.3 364,826 - -1.1 364,826 - -0.8 364,826 - -1.9 364,826 - -0.5 364,826 - -2.0 364,998 + +1.2 365,163 + AZOBR_RS23770 0.13 -0.3 365,163 + AZOBR_RS23770 0.13 +1.9 365,163 + AZOBR_RS23770 0.13 +1.1 365,163 + AZOBR_RS23770 0.13 -2.3 365,164 - AZOBR_RS23770 0.13 -0.6 365,164 - AZOBR_RS23770 0.13 +0.7 365,164 - AZOBR_RS23770 0.13 +1.3 365,164 - AZOBR_RS23770 0.13 -2.6 365,395 - AZOBR_RS23770 0.25 -1.0 365,742 + AZOBR_RS23770 0.45 -0.1 365,742 + AZOBR_RS23770 0.45 -0.4 365,743 - AZOBR_RS23770 0.45 -0.2 366,102 + AZOBR_RS23770 0.65 +0.4 366,758 - +0.1 366,758 - +0.9 367,339 + +0.1 367,339 + -1.2 367,340 - +1.0 367,340 - -0.7
Or see this region's nucleotide sequence