Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23295 and AZOBR_RS23300 are separated by 231 nucleotides AZOBR_RS23300 and AZOBR_RS23305 are separated by 200 nucleotides
AZOBR_RS23295: AZOBR_RS23295 - transcriptional regulator, at 252,233 to 253,039
_RS23295
AZOBR_RS23300: AZOBR_RS23300 - dihydrodipicolinate synthase, at 253,271 to 254,185
_RS23300
AZOBR_RS23305: AZOBR_RS23305 - hypothetical protein, at 254,386 to 255,366
_RS23305
Position (kb) 253
254
255 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 252.544 kb on - strand, within AZOBR_RS23295 at 252.771 kb on + strand, within AZOBR_RS23295 at 253.305 kb on + strand at 253.603 kb on - strand, within AZOBR_RS23300 at 253.755 kb on + strand, within AZOBR_RS23300 at 253.755 kb on + strand, within AZOBR_RS23300 at 253.776 kb on + strand, within AZOBR_RS23300 at 253.777 kb on - strand, within AZOBR_RS23300 at 253.777 kb on - strand, within AZOBR_RS23300 at 253.777 kb on - strand, within AZOBR_RS23300 at 253.777 kb on - strand, within AZOBR_RS23300 at 253.777 kb on - strand, within AZOBR_RS23300 at 253.857 kb on + strand, within AZOBR_RS23300 at 253.857 kb on + strand, within AZOBR_RS23300 at 253.857 kb on + strand, within AZOBR_RS23300 at 254.531 kb on - strand, within AZOBR_RS23305 at 254.531 kb on - strand, within AZOBR_RS23305 at 254.632 kb on + strand, within AZOBR_RS23305 at 254.632 kb on + strand, within AZOBR_RS23305 at 254.632 kb on + strand, within AZOBR_RS23305 at 254.632 kb on + strand, within AZOBR_RS23305 at 254.632 kb on + strand, within AZOBR_RS23305 at 254.633 kb on - strand, within AZOBR_RS23305 at 254.633 kb on - strand, within AZOBR_RS23305 at 254.634 kb on + strand, within AZOBR_RS23305 at 254.634 kb on + strand, within AZOBR_RS23305 at 254.634 kb on + strand, within AZOBR_RS23305 at 254.634 kb on + strand, within AZOBR_RS23305 at 254.635 kb on - strand, within AZOBR_RS23305 at 254.690 kb on - strand, within AZOBR_RS23305 at 254.690 kb on - strand, within AZOBR_RS23305 at 254.728 kb on + strand, within AZOBR_RS23305 at 254.728 kb on + strand, within AZOBR_RS23305 at 254.729 kb on - strand, within AZOBR_RS23305 at 254.729 kb on - strand, within AZOBR_RS23305 at 255.092 kb on - strand, within AZOBR_RS23305 at 255.134 kb on - strand, within AZOBR_RS23305
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 252,544 - AZOBR_RS23295 0.39 -0.3 252,771 + AZOBR_RS23295 0.67 -0.1 253,305 + +0.6 253,603 - AZOBR_RS23300 0.36 +0.9 253,755 + AZOBR_RS23300 0.53 +0.4 253,755 + AZOBR_RS23300 0.53 +0.1 253,776 + AZOBR_RS23300 0.55 +0.4 253,777 - AZOBR_RS23300 0.55 +1.9 253,777 - AZOBR_RS23300 0.55 -0.4 253,777 - AZOBR_RS23300 0.55 -3.4 253,777 - AZOBR_RS23300 0.55 +0.2 253,777 - AZOBR_RS23300 0.55 -2.9 253,857 + AZOBR_RS23300 0.64 +0.3 253,857 + AZOBR_RS23300 0.64 -1.9 253,857 + AZOBR_RS23300 0.64 -0.9 254,531 - AZOBR_RS23305 0.15 +0.7 254,531 - AZOBR_RS23305 0.15 -2.7 254,632 + AZOBR_RS23305 0.25 -1.3 254,632 + AZOBR_RS23305 0.25 +0.4 254,632 + AZOBR_RS23305 0.25 -2.1 254,632 + AZOBR_RS23305 0.25 -0.4 254,632 + AZOBR_RS23305 0.25 -1.1 254,633 - AZOBR_RS23305 0.25 -0.2 254,633 - AZOBR_RS23305 0.25 +0.2 254,634 + AZOBR_RS23305 0.25 -0.3 254,634 + AZOBR_RS23305 0.25 +1.0 254,634 + AZOBR_RS23305 0.25 +0.5 254,634 + AZOBR_RS23305 0.25 -0.6 254,635 - AZOBR_RS23305 0.25 +0.9 254,690 - AZOBR_RS23305 0.31 -0.0 254,690 - AZOBR_RS23305 0.31 +0.8 254,728 + AZOBR_RS23305 0.35 -3.1 254,728 + AZOBR_RS23305 0.35 +2.1 254,729 - AZOBR_RS23305 0.35 -0.5 254,729 - AZOBR_RS23305 0.35 +0.7 255,092 - AZOBR_RS23305 0.72 +0.2 255,134 - AZOBR_RS23305 0.76 -3.5
Or see this region's nucleotide sequence