Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS22750

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS22745 and AZOBR_RS22750 are separated by 51 nucleotidesAZOBR_RS22750 and AZOBR_RS22755 are separated by 46 nucleotides AZOBR_RS22745: AZOBR_RS22745 - ATPase AAA, at 111,152 to 113,818 _RS22745 AZOBR_RS22750: AZOBR_RS22750 - glutamyl-tRNA(Gln) amidotransferase, at 113,870 to 115,282 _RS22750 AZOBR_RS22755: AZOBR_RS22755 - dihydropyrimidinase, at 115,329 to 116,765 _RS22755 Position (kb) 113 114 115 116Strain fitness (log2 ratio) -2 -1 0 1at 113.051 kb on + strand, within AZOBR_RS22745at 113.051 kb on + strand, within AZOBR_RS22745at 113.052 kb on - strand, within AZOBR_RS22745at 113.108 kb on + strand, within AZOBR_RS22745at 113.109 kb on - strand, within AZOBR_RS22745at 113.949 kb on + strandat 114.045 kb on + strand, within AZOBR_RS22750at 114.046 kb on - strand, within AZOBR_RS22750at 114.046 kb on - strand, within AZOBR_RS22750at 114.046 kb on - strand, within AZOBR_RS22750at 114.046 kb on - strand, within AZOBR_RS22750at 114.315 kb on + strand, within AZOBR_RS22750at 114.840 kb on + strand, within AZOBR_RS22750at 114.841 kb on - strand, within AZOBR_RS22750at 114.841 kb on - strand, within AZOBR_RS22750at 115.002 kb on + strand, within AZOBR_RS22750at 115.002 kb on + strand, within AZOBR_RS22750at 115.002 kb on + strand, within AZOBR_RS22750at 115.003 kb on - strand, within AZOBR_RS22750at 115.331 kb on - strandat 115.427 kb on + strandat 115.498 kb on + strand, within AZOBR_RS22755at 115.498 kb on + strand, within AZOBR_RS22755at 115.499 kb on - strand, within AZOBR_RS22755at 115.499 kb on - strand, within AZOBR_RS22755at 115.499 kb on - strand, within AZOBR_RS22755at 115.508 kb on - strand, within AZOBR_RS22755at 115.625 kb on - strand, within AZOBR_RS22755at 115.963 kb on + strand, within AZOBR_RS22755at 115.963 kb on + strand, within AZOBR_RS22755at 115.964 kb on - strand, within AZOBR_RS22755at 115.964 kb on - strand, within AZOBR_RS22755at 115.964 kb on - strand, within AZOBR_RS22755

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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113,051 + AZOBR_RS22745 0.71 +0.1
113,051 + AZOBR_RS22745 0.71 -0.6
113,052 - AZOBR_RS22745 0.71 -0.2
113,108 + AZOBR_RS22745 0.73 +0.6
113,109 - AZOBR_RS22745 0.73 +0.8
113,949 + +1.7
114,045 + AZOBR_RS22750 0.12 +0.7
114,046 - AZOBR_RS22750 0.12 -1.2
114,046 - AZOBR_RS22750 0.12 -0.9
114,046 - AZOBR_RS22750 0.12 -0.0
114,046 - AZOBR_RS22750 0.12 +1.1
114,315 + AZOBR_RS22750 0.31 +0.5
114,840 + AZOBR_RS22750 0.69 -0.0
114,841 - AZOBR_RS22750 0.69 -0.6
114,841 - AZOBR_RS22750 0.69 -0.1
115,002 + AZOBR_RS22750 0.80 +0.8
115,002 + AZOBR_RS22750 0.80 -0.2
115,002 + AZOBR_RS22750 0.80 -0.1
115,003 - AZOBR_RS22750 0.80 -0.5
115,331 - +0.9
115,427 + +0.1
115,498 + AZOBR_RS22755 0.12 -0.9
115,498 + AZOBR_RS22755 0.12 +0.4
115,499 - AZOBR_RS22755 0.12 +0.6
115,499 - AZOBR_RS22755 0.12 +0.5
115,499 - AZOBR_RS22755 0.12 -0.4
115,508 - AZOBR_RS22755 0.12 -0.4
115,625 - AZOBR_RS22755 0.21 +0.2
115,963 + AZOBR_RS22755 0.44 +0.5
115,963 + AZOBR_RS22755 0.44 +0.1
115,964 - AZOBR_RS22755 0.44 -2.5
115,964 - AZOBR_RS22755 0.44 +1.7
115,964 - AZOBR_RS22755 0.44 +0.4

Or see this region's nucleotide sequence