Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS22740
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
109,193 | + | -0.6 | |||
109,310 | + | -0.2 | |||
109,311 | - | +0.6 | |||
109,311 | - | +0.0 | |||
109,530 | + | +0.0 | |||
109,530 | + | -1.4 | |||
109,530 | + | -0.8 | |||
109,531 | - | -0.3 | |||
109,531 | - | +1.7 | |||
109,531 | - | -0.5 | |||
109,531 | - | +1.3 | |||
109,531 | - | +0.4 | |||
109,531 | - | +0.1 | |||
109,531 | - | +0.6 | |||
109,699 | - | +0.3 | |||
109,798 | - | +1.0 | |||
110,144 | + | AZOBR_RS22740 | 0.13 | +0.2 | |
110,144 | + | AZOBR_RS22740 | 0.13 | +1.9 | |
110,144 | + | AZOBR_RS22740 | 0.13 | -0.9 | |
110,270 | + | AZOBR_RS22740 | 0.28 | -0.8 | |
110,271 | - | AZOBR_RS22740 | 0.28 | +0.7 | |
110,271 | - | AZOBR_RS22740 | 0.28 | -0.7 | |
110,271 | - | AZOBR_RS22740 | 0.28 | -0.6 | |
110,358 | - | AZOBR_RS22740 | 0.39 | +0.9 | |
110,649 | - | AZOBR_RS22740 | 0.73 | -0.0 | |
110,649 | - | AZOBR_RS22740 | 0.73 | -0.2 | |
110,649 | - | AZOBR_RS22740 | 0.73 | +0.6 | |
110,653 | + | AZOBR_RS22740 | 0.74 | +0.6 | |
110,654 | - | AZOBR_RS22740 | 0.74 | +0.7 | |
110,871 | + | +0.5 | |||
110,872 | - | +0.3 | |||
110,907 | + | -0.2 | |||
110,926 | - | -0.7 | |||
111,134 | + | -0.5 | |||
111,644 | + | AZOBR_RS22745 | 0.18 | -2.1 | |
111,645 | - | AZOBR_RS22745 | 0.18 | +0.1 |
Or see this region's nucleotide sequence