Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS22165
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,745,734 | - | AZOBR_RS22160 | 0.68 | +0.5 | |
1,745,779 | - | AZOBR_RS22160 | 0.70 | +0.6 | |
1,745,779 | - | AZOBR_RS22160 | 0.70 | +0.6 | |
1,745,779 | - | AZOBR_RS22160 | 0.70 | +1.1 | |
1,745,779 | - | AZOBR_RS22160 | 0.70 | +0.4 | |
1,746,182 | + | AZOBR_RS22160 | 0.85 | +0.8 | |
1,746,304 | - | -3.5 | |||
1,746,342 | + | +0.4 | |||
1,746,363 | + | -0.1 | |||
1,746,364 | - | -1.2 | |||
1,746,366 | + | +1.8 | |||
1,746,367 | - | +1.1 | |||
1,746,367 | - | +1.1 | |||
1,746,367 | - | -0.7 | |||
1,746,672 | + | -2.9 | |||
1,746,805 | - | AZOBR_RS22165 | 0.24 | -0.4 | |
1,746,805 | - | AZOBR_RS22165 | 0.24 | +0.0 | |
1,746,805 | - | AZOBR_RS22165 | 0.24 | +1.4 | |
1,747,026 | + | AZOBR_RS22165 | 0.64 | -0.5 | |
1,747,027 | - | AZOBR_RS22165 | 0.64 | -4.2 | |
1,747,125 | + | AZOBR_RS22165 | 0.82 | -0.0 | |
1,747,125 | + | AZOBR_RS22165 | 0.82 | +0.1 | |
1,747,126 | - | AZOBR_RS22165 | 0.82 | -0.1 | |
1,747,126 | - | AZOBR_RS22165 | 0.82 | -1.4 | |
1,747,126 | - | AZOBR_RS22165 | 0.82 | -0.9 | |
1,747,392 | + | -0.5 | |||
1,747,393 | - | -0.0 | |||
1,747,393 | - | +0.6 |
Or see this region's nucleotide sequence