Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS20425
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,351,582 | + | AZOBR_RS20425 | 0.18 | -1.4 | |
1,351,582 | + | AZOBR_RS20425 | 0.18 | +0.0 | |
1,351,583 | - | AZOBR_RS20425 | 0.18 | +1.5 | |
1,351,712 | - | AZOBR_RS20425 | 0.36 | -0.8 | |
1,351,712 | - | AZOBR_RS20425 | 0.36 | -1.3 | |
1,351,840 | + | AZOBR_RS20425 | 0.54 | -0.5 | |
1,351,840 | + | AZOBR_RS20425 | 0.54 | -0.3 | |
1,351,841 | - | AZOBR_RS20425 | 0.54 | -0.3 | |
1,351,841 | - | AZOBR_RS20425 | 0.54 | -0.6 | |
1,351,841 | - | AZOBR_RS20425 | 0.54 | +1.3 | |
1,351,849 | + | AZOBR_RS20425 | 0.55 | -0.2 | |
1,351,894 | + | AZOBR_RS20425 | 0.62 | -1.5 | |
1,351,948 | + | AZOBR_RS20425 | 0.69 | -0.3 | |
1,352,199 | + | -1.8 | |||
1,352,199 | + | +0.2 | |||
1,352,200 | - | +0.3 | |||
1,352,412 | - | AZOBR_RS20430 | 0.22 | +2.1 | |
1,352,601 | - | AZOBR_RS20430 | 0.44 | +0.0 | |
1,352,838 | - | AZOBR_RS20430 | 0.72 | -0.4 | |
1,352,861 | + | AZOBR_RS20430 | 0.75 | -0.7 | |
1,352,894 | + | AZOBR_RS20430 | 0.79 | -1.0 | |
1,352,894 | + | AZOBR_RS20430 | 0.79 | -1.0 | |
1,352,894 | + | AZOBR_RS20430 | 0.79 | +0.6 | |
1,352,894 | + | AZOBR_RS20430 | 0.79 | -0.4 | |
1,352,894 | + | AZOBR_RS20430 | 0.79 | -1.0 | |
1,352,895 | - | AZOBR_RS20430 | 0.79 | +0.9 | |
1,352,896 | - | AZOBR_RS20430 | 0.79 | -0.3 | |
1,353,147 | - | -1.8 | |||
1,353,147 | - | -1.9 |
Or see this region's nucleotide sequence