Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS20260
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,312,529 | + | +2.0 | |||
1,312,629 | + | +0.1 | |||
1,313,148 | + | -0.1 | |||
1,313,149 | - | -0.6 | |||
1,313,161 | - | +0.8 | |||
1,313,161 | - | -0.4 | |||
1,313,191 | - | -1.4 | |||
1,313,247 | + | -1.8 | |||
1,313,350 | + | +0.5 | |||
1,313,356 | - | -1.2 | |||
1,313,356 | - | -1.5 | |||
1,313,356 | - | +1.0 | |||
1,313,763 | + | AZOBR_RS20260 | 0.10 | -0.2 | |
1,313,763 | + | AZOBR_RS20260 | 0.10 | +0.6 | |
1,313,763 | + | AZOBR_RS20260 | 0.10 | -1.7 | |
1,313,764 | - | AZOBR_RS20260 | 0.10 | -0.5 | |
1,315,218 | + | AZOBR_RS20260 | 0.52 | +0.5 | |
1,316,902 | + | +0.6 | |||
1,316,902 | + | +0.8 | |||
1,316,903 | - | -0.2 | |||
1,316,903 | - | -0.5 | |||
1,316,903 | - | +0.2 | |||
1,316,903 | - | +0.5 | |||
1,317,010 | + | AZOBR_RS20265 | 0.16 | -0.9 | |
1,317,010 | + | AZOBR_RS20265 | 0.16 | +0.8 | |
1,317,010 | + | AZOBR_RS20265 | 0.16 | -0.5 | |
1,317,010 | + | AZOBR_RS20265 | 0.16 | -0.5 | |
1,317,010 | + | AZOBR_RS20265 | 0.16 | +0.2 | |
1,317,115 | + | AZOBR_RS20265 | 0.32 | +0.1 | |
1,317,194 | - | AZOBR_RS20265 | 0.44 | +0.2 | |
1,317,299 | - | AZOBR_RS20265 | 0.60 | +1.5 | |
1,317,368 | - | AZOBR_RS20265 | 0.70 | +1.5 | |
1,317,643 | + | -0.5 | |||
1,317,644 | - | -0.2 | |||
1,317,692 | - | -0.1 |
Or see this region's nucleotide sequence