Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS15375 and AZOBR_RS15380 are separated by 185 nucleotides AZOBR_RS15380 and AZOBR_RS15385 are separated by 141 nucleotides AZOBR_RS15385 and AZOBR_RS15390 are separated by 119 nucleotides
AZOBR_RS15375: AZOBR_RS15375 - hypothetical protein, at 211,664 to 211,864
_RS15375
AZOBR_RS15380: AZOBR_RS15380 - hypothetical protein, at 212,050 to 212,526
_RS15380
AZOBR_RS15385: AZOBR_RS15385 - tRNA (uracil-5-)-methyltransferase, at 212,668 to 214,032
_RS15385
AZOBR_RS15390: AZOBR_RS15390 - chemotaxis protein, at 214,152 to 216,230
_RS15390
Position (kb) 212
213
214
215 Strain fitness (log2 ratio) -2
-1
0
1 at 211.785 kb on - strand, within AZOBR_RS15375 at 211.961 kb on + strand at 211.990 kb on - strand at 212.362 kb on + strand, within AZOBR_RS15380 at 212.425 kb on + strand, within AZOBR_RS15380 at 212.635 kb on + strand at 212.635 kb on + strand at 212.635 kb on + strand at 212.866 kb on + strand, within AZOBR_RS15385 at 212.867 kb on - strand, within AZOBR_RS15385 at 213.188 kb on - strand, within AZOBR_RS15385 at 213.188 kb on - strand, within AZOBR_RS15385 at 213.269 kb on - strand, within AZOBR_RS15385 at 213.431 kb on - strand, within AZOBR_RS15385 at 213.532 kb on + strand, within AZOBR_RS15385 at 213.533 kb on - strand, within AZOBR_RS15385 at 213.746 kb on - strand, within AZOBR_RS15385 at 213.746 kb on - strand, within AZOBR_RS15385 at 213.746 kb on - strand, within AZOBR_RS15385 at 213.890 kb on - strand, within AZOBR_RS15385 at 214.151 kb on + strand at 214.561 kb on - strand, within AZOBR_RS15390 at 214.609 kb on - strand, within AZOBR_RS15390 at 214.635 kb on + strand, within AZOBR_RS15390 at 214.635 kb on + strand, within AZOBR_RS15390 at 214.636 kb on - strand, within AZOBR_RS15390 at 214.689 kb on + strand, within AZOBR_RS15390 at 214.689 kb on + strand, within AZOBR_RS15390 at 214.689 kb on + strand, within AZOBR_RS15390 at 214.689 kb on + strand, within AZOBR_RS15390 at 214.690 kb on - strand, within AZOBR_RS15390 at 214.690 kb on - strand, within AZOBR_RS15390 at 214.690 kb on - strand, within AZOBR_RS15390
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 211,785 - AZOBR_RS15375 0.60 +0.2 211,961 + -0.7 211,990 - -0.4 212,362 + AZOBR_RS15380 0.65 +0.3 212,425 + AZOBR_RS15380 0.79 -0.2 212,635 + -0.0 212,635 + +1.1 212,635 + -1.5 212,866 + AZOBR_RS15385 0.15 +0.7 212,867 - AZOBR_RS15385 0.15 -2.4 213,188 - AZOBR_RS15385 0.38 -0.9 213,188 - AZOBR_RS15385 0.38 -0.5 213,269 - AZOBR_RS15385 0.44 +0.2 213,431 - AZOBR_RS15385 0.56 +0.1 213,532 + AZOBR_RS15385 0.63 +1.7 213,533 - AZOBR_RS15385 0.63 -1.1 213,746 - AZOBR_RS15385 0.79 -0.1 213,746 - AZOBR_RS15385 0.79 -0.7 213,746 - AZOBR_RS15385 0.79 -0.2 213,890 - AZOBR_RS15385 0.90 +0.0 214,151 + +0.1 214,561 - AZOBR_RS15390 0.20 -0.2 214,609 - AZOBR_RS15390 0.22 -0.7 214,635 + AZOBR_RS15390 0.23 +0.0 214,635 + AZOBR_RS15390 0.23 +0.1 214,636 - AZOBR_RS15390 0.23 +1.1 214,689 + AZOBR_RS15390 0.26 -0.5 214,689 + AZOBR_RS15390 0.26 +0.7 214,689 + AZOBR_RS15390 0.26 +0.1 214,689 + AZOBR_RS15390 0.26 -1.8 214,690 - AZOBR_RS15390 0.26 -0.4 214,690 - AZOBR_RS15390 0.26 -0.4 214,690 - AZOBR_RS15390 0.26 -0.2
Or see this region's nucleotide sequence