Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS14620
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
47,254 | + | -0.1 | |||
47,471 | - | +0.7 | |||
47,587 | + | +0.6 | |||
47,588 | - | -0.2 | |||
47,588 | - | -1.1 | |||
47,597 | - | +0.8 | |||
47,597 | - | +0.1 | |||
47,678 | - | +0.6 | |||
47,684 | - | -0.5 | |||
48,162 | - | -1.2 | |||
48,237 | + | -0.3 | |||
48,237 | + | +0.2 | |||
48,237 | + | -1.3 | |||
48,237 | + | +0.2 | |||
48,238 | - | +0.5 | |||
48,238 | - | +0.2 | |||
48,238 | - | +2.2 | |||
48,451 | - | AZOBR_RS14620 | 0.25 | -0.2 | |
48,648 | + | AZOBR_RS14620 | 0.43 | -2.5 | |
48,648 | + | AZOBR_RS14620 | 0.43 | -2.6 | |
48,838 | - | AZOBR_RS14620 | 0.60 | +0.1 | |
48,838 | - | AZOBR_RS14620 | 0.60 | +1.1 | |
48,891 | + | AZOBR_RS14620 | 0.65 | -0.6 | |
49,086 | + | AZOBR_RS14620 | 0.82 | -0.4 | |
49,086 | + | AZOBR_RS14620 | 0.82 | -0.1 | |
49,087 | - | AZOBR_RS14620 | 0.82 | +0.2 | |
49,087 | - | AZOBR_RS14620 | 0.82 | -1.4 | |
49,113 | + | AZOBR_RS14620 | 0.84 | -0.5 | |
49,113 | + | AZOBR_RS14620 | 0.84 | -2.5 | |
49,114 | - | AZOBR_RS14620 | 0.85 | +0.3 | |
49,114 | - | AZOBR_RS14620 | 0.85 | -0.0 | |
49,291 | + | +0.3 | |||
49,511 | - | AZOBR_RS14625 | 0.22 | -1.9 | |
49,511 | - | +2.0 |
Or see this region's nucleotide sequence