Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS14535
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
30,211 | + | +1.0 | |||
30,212 | - | +0.5 | |||
30,286 | + | -0.2 | |||
30,286 | + | +1.8 | |||
30,286 | + | +0.8 | |||
30,286 | + | +0.7 | |||
30,287 | - | +0.4 | |||
30,287 | - | -2.5 | |||
30,287 | - | +0.1 | |||
30,287 | - | -1.6 | |||
30,437 | - | +2.0 | |||
30,509 | - | +0.3 | |||
30,709 | + | +0.5 | |||
30,709 | + | -0.8 | |||
31,159 | + | +0.0 | |||
31,161 | + | -0.2 | |||
31,161 | + | -1.4 | |||
31,162 | - | +0.7 | |||
31,162 | - | +0.1 | |||
31,384 | - | -0.2 | |||
31,384 | - | -1.5 | |||
31,510 | - | AZOBR_RS14535 | 0.13 | -0.1 | |
31,510 | - | AZOBR_RS14535 | 0.13 | -2.3 | |
31,518 | + | AZOBR_RS14535 | 0.13 | +1.5 | |
32,463 | + | AZOBR_RS14535 | 0.53 | -0.0 | |
32,604 | + | AZOBR_RS14535 | 0.59 | -0.2 | |
33,567 | + | -1.2 | |||
33,609 | + | -0.7 | |||
33,644 | - | +0.8 | |||
33,644 | - | -0.7 | |||
33,644 | - | +0.2 | |||
33,644 | - | +0.6 | |||
33,668 | - | -0.3 | |||
33,668 | - | +0.1 | |||
33,836 | + | +1.3 | |||
33,837 | - | +0.1 | |||
33,849 | - | +1.5 | |||
34,072 | + | AZOBR_RS14540 | 0.22 | -0.0 | |
34,072 | + | AZOBR_RS14540 | 0.22 | +1.0 | |
34,198 | + | AZOBR_RS14540 | 0.36 | +0.4 | |
34,198 | + | AZOBR_RS14540 | 0.36 | +0.5 | |
34,199 | - | AZOBR_RS14540 | 0.36 | -1.3 | |
34,199 | - | AZOBR_RS14540 | 0.36 | -0.8 | |
34,426 | + | AZOBR_RS14540 | 0.62 | -1.6 |
Or see this region's nucleotide sequence