Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS13840 and AZOBR_RS13845 are separated by 89 nucleotides AZOBR_RS13845 and AZOBR_RS13850 are separated by 388 nucleotides AZOBR_RS13850 and AZOBR_RS13855 are separated by 204 nucleotides AZOBR_RS13855 and AZOBR_RS13860 are separated by 7 nucleotides
AZOBR_RS13840: AZOBR_RS13840 - hypothetical protein, at 2,915,565 to 2,915,750
_RS13840
AZOBR_RS13845: AZOBR_RS13845 - hypothetical protein, at 2,915,840 to 2,916,238
_RS13845
AZOBR_RS13850: AZOBR_RS13850 - hypothetical protein, at 2,916,627 to 2,916,869
_RS13850
AZOBR_RS13855: AZOBR_RS13855 - hypothetical protein, at 2,917,074 to 2,917,601
_RS13855
AZOBR_RS13860: AZOBR_RS13860 - hypothetical protein, at 2,917,609 to 2,917,914
_RS13860
Position (kb)
2916
2917 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2915.763 kb on + strand at 2915.764 kb on - strand at 2915.788 kb on + strand at 2915.789 kb on - strand at 2915.793 kb on + strand at 2915.793 kb on + strand at 2915.793 kb on + strand at 2915.793 kb on + strand at 2915.794 kb on - strand at 2915.794 kb on - strand at 2915.909 kb on + strand, within AZOBR_RS13845 at 2916.213 kb on - strand at 2916.216 kb on - strand at 2916.216 kb on - strand at 2916.285 kb on + strand at 2916.286 kb on - strand at 2916.528 kb on + strand at 2916.695 kb on - strand, within AZOBR_RS13850 at 2916.837 kb on + strand, within AZOBR_RS13850 at 2916.838 kb on - strand, within AZOBR_RS13850 at 2916.841 kb on - strand, within AZOBR_RS13850 at 2916.841 kb on - strand, within AZOBR_RS13850 at 2916.941 kb on + strand at 2916.941 kb on + strand at 2916.941 kb on + strand at 2916.942 kb on - strand at 2917.065 kb on + strand at 2917.065 kb on + strand at 2917.065 kb on + strand at 2917.065 kb on + strand at 2917.066 kb on - strand at 2917.066 kb on - strand at 2917.098 kb on + strand at 2917.600 kb on - strand at 2917.664 kb on - strand, within AZOBR_RS13860
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,915,763 + -1.2 2,915,764 - +0.3 2,915,788 + -1.1 2,915,789 - +0.4 2,915,793 + -0.7 2,915,793 + -1.5 2,915,793 + -2.4 2,915,793 + -0.8 2,915,794 - -1.4 2,915,794 - -1.2 2,915,909 + AZOBR_RS13845 0.17 +0.2 2,916,213 - +0.9 2,916,216 - -0.3 2,916,216 - -0.3 2,916,285 + +0.0 2,916,286 - -0.7 2,916,528 + -4.3 2,916,695 - AZOBR_RS13850 0.28 -0.9 2,916,837 + AZOBR_RS13850 0.86 -0.6 2,916,838 - AZOBR_RS13850 0.87 +0.1 2,916,841 - AZOBR_RS13850 0.88 -0.7 2,916,841 - AZOBR_RS13850 0.88 -1.8 2,916,941 + -1.8 2,916,941 + +0.1 2,916,941 + -0.8 2,916,942 - +0.8 2,917,065 + -0.9 2,917,065 + -3.8 2,917,065 + +0.7 2,917,065 + -2.5 2,917,066 - +0.8 2,917,066 - -1.5 2,917,098 + -0.3 2,917,600 - -1.4 2,917,664 - AZOBR_RS13860 0.18 -0.4
Or see this region's nucleotide sequence