Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS08040
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB |
|---|---|---|---|---|---|
| remove | |||||
| 1,694,966 | - | AZOBR_RS08035 | 0.43 | +0.0 | |
| 1,694,966 | - | AZOBR_RS08035 | 0.43 | -1.0 | |
| 1,694,966 | - | AZOBR_RS08035 | 0.43 | +0.8 | |
| 1,695,037 | + | AZOBR_RS08035 | 0.54 | -0.6 | |
| 1,695,432 | + | -0.1 | |||
| 1,695,477 | + | +0.5 | |||
| 1,695,478 | - | +0.3 | |||
| 1,696,048 | + | AZOBR_RS08040 | 0.50 | -1.6 | |
| 1,696,048 | + | AZOBR_RS08040 | 0.50 | -3.2 | |
| 1,696,048 | + | AZOBR_RS08040 | 0.50 | +0.0 | |
| 1,696,049 | - | AZOBR_RS08040 | 0.51 | -0.9 | |
| 1,696,413 | + | +1.5 | |||
| 1,696,414 | - | +0.1 | |||
| 1,696,434 | + | +0.1 | |||
| 1,696,485 | + | +0.2 | |||
| 1,696,486 | - | +1.2 | |||
| 1,696,486 | - | -2.4 | |||
| 1,697,324 | + | AZOBR_RS08045 | 0.55 | +0.1 | |
| 1,697,324 | + | AZOBR_RS08045 | 0.55 | +0.1 | |
| 1,697,324 | + | AZOBR_RS08045 | 0.55 | -1.5 | |
| 1,697,325 | - | AZOBR_RS08045 | 0.55 | -0.2 | |
| 1,697,325 | - | AZOBR_RS08045 | 0.55 | +0.3 |
Or see this region's nucleotide sequence