Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02485 and AZOBR_RS02490 are separated by 139 nucleotides AZOBR_RS02490 and AZOBR_RS02495 are separated by 294 nucleotides
AZOBR_RS02485: AZOBR_RS02485 - muraminidase, at 518,701 to 519,192
_RS02485
AZOBR_RS02490: AZOBR_RS02490 - conserved protein of unknown function (Usg-like), at 519,332 to 519,595
_RS02490
AZOBR_RS02495: AZOBR_RS02495 - molecular chaperone GroES, at 519,890 to 520,180
_RS02495
Position (kb) 518
519
520 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 518.001 kb on - strand at 518.001 kb on - strand at 518.001 kb on - strand at 518.012 kb on + strand at 518.033 kb on + strand at 518.034 kb on - strand at 518.565 kb on - strand at 518.636 kb on + strand at 518.636 kb on + strand at 518.636 kb on + strand at 518.636 kb on + strand at 518.636 kb on + strand at 518.637 kb on - strand at 518.637 kb on - strand at 518.637 kb on - strand at 518.637 kb on - strand at 518.637 kb on - strand at 518.831 kb on + strand, within AZOBR_RS02485 at 518.867 kb on + strand, within AZOBR_RS02485 at 518.867 kb on + strand, within AZOBR_RS02485 at 519.025 kb on + strand, within AZOBR_RS02485 at 519.122 kb on + strand, within AZOBR_RS02485 at 519.122 kb on + strand, within AZOBR_RS02485 at 519.122 kb on + strand, within AZOBR_RS02485 at 519.123 kb on - strand, within AZOBR_RS02485 at 519.123 kb on - strand, within AZOBR_RS02485 at 519.134 kb on + strand, within AZOBR_RS02485 at 519.135 kb on - strand, within AZOBR_RS02485 at 519.501 kb on + strand, within AZOBR_RS02490 at 519.501 kb on + strand, within AZOBR_RS02490 at 519.502 kb on - strand, within AZOBR_RS02490
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 518,001 - -1.0 518,001 - +0.8 518,001 - +0.0 518,012 + +0.4 518,033 + +1.1 518,034 - -1.5 518,565 - +0.6 518,636 + -4.2 518,636 + +1.6 518,636 + -0.3 518,636 + -0.1 518,636 + -0.1 518,637 - +4.1 518,637 - -0.5 518,637 - +0.7 518,637 - -0.0 518,637 - +1.1 518,831 + AZOBR_RS02485 0.26 +0.3 518,867 + AZOBR_RS02485 0.34 -0.8 518,867 + AZOBR_RS02485 0.34 -0.3 519,025 + AZOBR_RS02485 0.66 -1.0 519,122 + AZOBR_RS02485 0.86 -2.4 519,122 + AZOBR_RS02485 0.86 +0.2 519,122 + AZOBR_RS02485 0.86 -1.4 519,123 - AZOBR_RS02485 0.86 -2.5 519,123 - AZOBR_RS02485 0.86 -1.5 519,134 + AZOBR_RS02485 0.88 +0.4 519,135 - AZOBR_RS02485 0.88 +0.9 519,501 + AZOBR_RS02490 0.64 -0.0 519,501 + AZOBR_RS02490 0.64 -0.9 519,502 - AZOBR_RS02490 0.64 +1.4
Or see this region's nucleotide sequence