Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2965 and DvMF_2966 are separated by 172 nucleotides DvMF_2966 and DvMF_2967 are separated by 184 nucleotides DvMF_2967 and DvMF_2968 are separated by 180 nucleotides
DvMF_2965: DvMF_2965 - 17 kDa surface antigen (RefSeq), at 3,740,716 to 3,741,174
_2965
DvMF_2966: DvMF_2966 - hypothetical protein (RefSeq), at 3,741,347 to 3,741,901
_2966
DvMF_2967: DvMF_2967 - RarD protein, DMT superfamily transporter (RefSeq), at 3,742,086 to 3,743,000
_2967
DvMF_2968: DvMF_2968 - extracellular solute-binding protein family 1 (RefSeq), at 3,743,181 to 3,744,251
_2968
Position (kb)
3742
3743
3744 Strain fitness (log2 ratio)
-2
-1
0
1 at 3741.196 kb on - strand at 3741.601 kb on - strand, within DvMF_2966 at 3741.601 kb on - strand, within DvMF_2966 at 3741.617 kb on - strand, within DvMF_2966 at 3741.634 kb on + strand, within DvMF_2966 at 3741.669 kb on - strand, within DvMF_2966 at 3741.916 kb on - strand at 3741.918 kb on + strand at 3742.027 kb on - strand at 3742.143 kb on - strand at 3742.152 kb on + strand at 3742.615 kb on - strand, within DvMF_2967 at 3742.757 kb on + strand, within DvMF_2967 at 3742.827 kb on - strand, within DvMF_2967 at 3742.932 kb on + strand at 3743.052 kb on - strand at 3743.220 kb on + strand at 3743.267 kb on - strand at 3743.486 kb on + strand, within DvMF_2968 at 3743.551 kb on - strand, within DvMF_2968 at 3743.551 kb on - strand, within DvMF_2968 at 3743.555 kb on + strand, within DvMF_2968 at 3743.555 kb on + strand, within DvMF_2968 at 3743.622 kb on + strand, within DvMF_2968 at 3743.728 kb on + strand, within DvMF_2968
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 3,741,196 - -0.5 3,741,601 - DvMF_2966 0.46 +0.3 3,741,601 - DvMF_2966 0.46 -0.0 3,741,617 - DvMF_2966 0.49 -1.9 3,741,634 + DvMF_2966 0.52 -0.3 3,741,669 - DvMF_2966 0.58 +0.2 3,741,916 - -0.4 3,741,918 + -0.5 3,742,027 - -0.6 3,742,143 - -0.9 3,742,152 + -0.3 3,742,615 - DvMF_2967 0.58 -0.6 3,742,757 + DvMF_2967 0.73 -0.7 3,742,827 - DvMF_2967 0.81 -0.1 3,742,932 + -0.7 3,743,052 - -0.7 3,743,220 + -0.4 3,743,267 - -0.4 3,743,486 + DvMF_2968 0.28 -1.1 3,743,551 - DvMF_2968 0.35 -0.4 3,743,551 - DvMF_2968 0.35 -0.1 3,743,555 + DvMF_2968 0.35 -0.3 3,743,555 + DvMF_2968 0.35 -0.2 3,743,622 + DvMF_2968 0.41 -0.3 3,743,728 + DvMF_2968 0.51 -0.1
Or see this region's nucleotide sequence