Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1925 and DvMF_1926 are separated by 434 nucleotides DvMF_1926 and DvMF_1927 are separated by 73 nucleotides DvMF_1927 and DvMF_1928 are separated by 231 nucleotides
DvMF_1925: DvMF_1925 - aminoglycoside phosphotransferase (RefSeq), at 2,373,740 to 2,375,062
_1925
DvMF_1926: DvMF_1926 - transcriptional regulator, TraR/DksA family (RefSeq), at 2,375,497 to 2,375,838
_1926
DvMF_1927: DvMF_1927 - glycosyl transferase family 2 (RefSeq), at 2,375,912 to 2,377,843
_1927
DvMF_1928: DvMF_1928 - FAD dependent oxidoreductase (RefSeq), at 2,378,075 to 2,379,457
_1928
Position (kb)
2375
2376
2377
2378 Strain fitness (log2 ratio)
-1
0
1 at 2374.973 kb on - strand at 2375.478 kb on + strand at 2375.491 kb on - strand at 2375.570 kb on - strand, within DvMF_1926 at 2375.594 kb on - strand, within DvMF_1926 at 2375.823 kb on + strand at 2375.895 kb on + strand at 2375.925 kb on + strand at 2376.025 kb on - strand at 2376.360 kb on - strand, within DvMF_1927 at 2376.380 kb on + strand, within DvMF_1927 at 2376.424 kb on - strand, within DvMF_1927 at 2376.456 kb on + strand, within DvMF_1927 at 2376.539 kb on - strand, within DvMF_1927 at 2376.630 kb on + strand, within DvMF_1927 at 2376.902 kb on - strand, within DvMF_1927 at 2377.018 kb on + strand, within DvMF_1927 at 2377.224 kb on + strand, within DvMF_1927 at 2377.338 kb on - strand, within DvMF_1927 at 2377.481 kb on - strand, within DvMF_1927 at 2377.539 kb on - strand, within DvMF_1927 at 2377.936 kb on + strand at 2378.059 kb on + strand at 2378.537 kb on + strand, within DvMF_1928 at 2378.620 kb on - strand, within DvMF_1928
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 2,374,973 - -0.1 2,375,478 + -0.1 2,375,491 - +0.4 2,375,570 - DvMF_1926 0.21 -0.3 2,375,594 - DvMF_1926 0.28 -0.5 2,375,823 + -0.0 2,375,895 + -0.8 2,375,925 + -0.0 2,376,025 - -0.3 2,376,360 - DvMF_1927 0.23 -0.2 2,376,380 + DvMF_1927 0.24 -1.1 2,376,424 - DvMF_1927 0.27 +0.0 2,376,456 + DvMF_1927 0.28 -0.4 2,376,539 - DvMF_1927 0.32 -0.2 2,376,630 + DvMF_1927 0.37 -0.3 2,376,902 - DvMF_1927 0.51 -0.2 2,377,018 + DvMF_1927 0.57 -0.4 2,377,224 + DvMF_1927 0.68 -0.3 2,377,338 - DvMF_1927 0.74 +0.1 2,377,481 - DvMF_1927 0.81 -0.4 2,377,539 - DvMF_1927 0.84 +0.1 2,377,936 + +0.5 2,378,059 + -0.9 2,378,537 + DvMF_1928 0.33 +1.1 2,378,620 - DvMF_1928 0.39 +0.1
Or see this region's nucleotide sequence