Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1593 and DvMF_1594 overlap by 25 nucleotides DvMF_1594 and DvMF_1595 overlap by 4 nucleotides DvMF_1595 and DvMF_1596 overlap by 8 nucleotides
DvMF_1593: DvMF_1593 - NADH-ubiquinone/plastoquinone oxidoreductase chain 3 (RefSeq), at 1,966,029 to 1,966,409
_1593
DvMF_1594: DvMF_1594 - NADH-quinone oxidoreductase, B subunit (RefSeq), at 1,966,385 to 1,966,948
_1594
DvMF_1595: DvMF_1595 - NADH dehydrogenase (ubiquinone) 30 kDa subunit (RefSeq), at 1,966,945 to 1,967,550
_1595
DvMF_1596: DvMF_1596 - NADH dehydrogenase (quinone) (RefSeq), at 1,967,543 to 1,968,763
_1596
Position (kb)
1966
1967 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1965.404 kb on - strand at 1965.526 kb on - strand at 1965.552 kb on - strand at 1965.627 kb on - strand at 1965.634 kb on + strand at 1965.705 kb on + strand at 1965.713 kb on - strand at 1966.117 kb on - strand, within DvMF_1593 at 1966.178 kb on - strand, within DvMF_1593 at 1966.286 kb on + strand, within DvMF_1593 at 1966.301 kb on - strand, within DvMF_1593 at 1966.329 kb on + strand, within DvMF_1593 at 1966.355 kb on + strand, within DvMF_1593 at 1966.355 kb on + strand, within DvMF_1593 at 1966.780 kb on + strand, within DvMF_1594 at 1966.854 kb on + strand, within DvMF_1594 at 1967.048 kb on - strand, within DvMF_1595 at 1967.050 kb on + strand, within DvMF_1595 at 1967.050 kb on + strand, within DvMF_1595 at 1967.230 kb on + strand, within DvMF_1595 at 1967.319 kb on + strand, within DvMF_1595 at 1967.327 kb on - strand, within DvMF_1595 at 1967.833 kb on + strand, within DvMF_1596
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,965,404 - -0.4 1,965,526 - -0.0 1,965,552 - -1.2 1,965,627 - -0.4 1,965,634 + -0.5 1,965,705 + -0.7 1,965,713 - -0.5 1,966,117 - DvMF_1593 0.23 -0.5 1,966,178 - DvMF_1593 0.39 -0.4 1,966,286 + DvMF_1593 0.67 +0.0 1,966,301 - DvMF_1593 0.71 -0.3 1,966,329 + DvMF_1593 0.79 +2.2 1,966,355 + DvMF_1593 0.86 -0.7 1,966,355 + DvMF_1593 0.86 -0.5 1,966,780 + DvMF_1594 0.70 +0.0 1,966,854 + DvMF_1594 0.83 -2.2 1,967,048 - DvMF_1595 0.17 +1.4 1,967,050 + DvMF_1595 0.17 -0.6 1,967,050 + DvMF_1595 0.17 +0.2 1,967,230 + DvMF_1595 0.47 -0.6 1,967,319 + DvMF_1595 0.62 -0.2 1,967,327 - DvMF_1595 0.63 +0.5 1,967,833 + DvMF_1596 0.24 -0.5
Or see this region's nucleotide sequence