Experiment: rich MoYLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1368 and DvMF_1369 are separated by 472 nucleotides DvMF_1369 and DvMF_1370 are separated by 10 nucleotides DvMF_1370 and DvMF_1371 are separated by 495 nucleotides DvMF_1371 and DvMF_1372 are separated by 108 nucleotides
DvMF_1368: DvMF_1368 - glycoside hydrolase family 13 domain protein (RefSeq), at 1,676,884 to 1,677,198
_1368
DvMF_1369: DvMF_1369 - hypothetical protein (RefSeq), at 1,677,671 to 1,678,063
_1369
DvMF_1370: DvMF_1370 - DNA binding domain protein, excisionase family (RefSeq), at 1,678,074 to 1,678,358
_1370
DvMF_1371: DvMF_1371 - no description, at 1,678,854 to 1,678,958
_1371
DvMF_1372: DvMF_1372 - methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq), at 1,679,067 to 1,681,502
_1372
Position (kb)
1678
1679 Strain fitness (log2 ratio)
-1
0
1 at 1677.115 kb on + strand, within DvMF_1368 at 1677.562 kb on - strand at 1677.715 kb on + strand, within DvMF_1369 at 1677.738 kb on - strand, within DvMF_1369 at 1678.097 kb on + strand at 1678.248 kb on + strand, within DvMF_1370 at 1678.311 kb on + strand, within DvMF_1370 at 1678.337 kb on + strand at 1678.338 kb on + strand at 1678.345 kb on - strand at 1678.396 kb on + strand at 1678.446 kb on + strand at 1678.613 kb on + strand at 1678.616 kb on - strand at 1678.790 kb on + strand at 1679.204 kb on - strand at 1679.265 kb on + strand at 1679.286 kb on - strand at 1679.325 kb on + strand, within DvMF_1372
Per-strain Table
Position Strand Gene LocusTag Fraction rich MoYLS4 remove 1,677,115 + DvMF_1368 0.73 -0.5 1,677,562 - -1.2 1,677,715 + DvMF_1369 0.11 -0.5 1,677,738 - DvMF_1369 0.17 -0.1 1,678,097 + +0.2 1,678,248 + DvMF_1370 0.61 -0.5 1,678,311 + DvMF_1370 0.83 -0.2 1,678,337 + -0.3 1,678,338 + -0.4 1,678,345 - -1.1 1,678,396 + -0.2 1,678,446 + +0.0 1,678,613 + +0.3 1,678,616 - +0.3 1,678,790 + +0.1 1,679,204 - -0.5 1,679,265 + -0.4 1,679,286 - +0.1 1,679,325 + DvMF_1372 0.11 -0.3
Or see this region's nucleotide sequence