Experiment: m.b. Chlorate 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2720 and Dshi_2721 are separated by 75 nucleotides Dshi_2721 and Dshi_2722 are separated by 84 nucleotides Dshi_2722 and Dshi_2723 are separated by 213 nucleotides
Dshi_2720: Dshi_2720 - Endonuclease/exonuclease/phosphatase (RefSeq), at 2,881,448 to 2,882,575
_2720
Dshi_2721: Dshi_2721 - peptidase M24 (RefSeq), at 2,882,651 to 2,884,507
_2721
Dshi_2722: Dshi_2722 - protein of unknown function DUF427 (RefSeq), at 2,884,592 to 2,884,933
_2722
Dshi_2723: Dshi_2723 - Intracellular septation protein A (RefSeq), at 2,885,147 to 2,885,776
_2723
Position (kb)
2882
2883
2884
2885 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2881.709 kb on - strand, within Dshi_2720 at 2881.720 kb on - strand, within Dshi_2720 at 2881.932 kb on + strand, within Dshi_2720 at 2882.044 kb on - strand, within Dshi_2720 at 2882.160 kb on + strand, within Dshi_2720 at 2882.169 kb on - strand, within Dshi_2720 at 2882.341 kb on + strand, within Dshi_2720 at 2882.360 kb on + strand, within Dshi_2720 at 2882.446 kb on + strand, within Dshi_2720 at 2882.488 kb on + strand at 2882.527 kb on + strand at 2882.625 kb on + strand at 2882.630 kb on + strand at 2882.741 kb on + strand at 2882.768 kb on - strand at 2882.884 kb on + strand, within Dshi_2721 at 2883.058 kb on - strand, within Dshi_2721 at 2883.074 kb on - strand, within Dshi_2721 at 2883.357 kb on + strand, within Dshi_2721 at 2883.390 kb on - strand, within Dshi_2721 at 2883.429 kb on - strand, within Dshi_2721 at 2883.511 kb on + strand, within Dshi_2721 at 2883.572 kb on + strand, within Dshi_2721 at 2883.654 kb on + strand, within Dshi_2721 at 2883.678 kb on + strand, within Dshi_2721 at 2883.824 kb on + strand, within Dshi_2721 at 2884.133 kb on - strand, within Dshi_2721 at 2884.203 kb on - strand, within Dshi_2721 at 2884.345 kb on + strand at 2884.549 kb on + strand at 2884.635 kb on - strand, within Dshi_2722 at 2884.650 kb on + strand, within Dshi_2722 at 2884.687 kb on + strand, within Dshi_2722 at 2884.754 kb on - strand, within Dshi_2722 at 2884.778 kb on - strand, within Dshi_2722 at 2885.017 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorate 40 mM remove 2,881,709 - Dshi_2720 0.23 -1.0 2,881,720 - Dshi_2720 0.24 -0.0 2,881,932 + Dshi_2720 0.43 +0.3 2,882,044 - Dshi_2720 0.53 -0.6 2,882,160 + Dshi_2720 0.63 -0.2 2,882,169 - Dshi_2720 0.64 -1.0 2,882,341 + Dshi_2720 0.79 -1.0 2,882,360 + Dshi_2720 0.81 -0.5 2,882,446 + Dshi_2720 0.88 +0.0 2,882,488 + +0.4 2,882,527 + -0.4 2,882,625 + -0.0 2,882,630 + -0.0 2,882,741 + +0.2 2,882,768 - +0.0 2,882,884 + Dshi_2721 0.13 -1.6 2,883,058 - Dshi_2721 0.22 +0.6 2,883,074 - Dshi_2721 0.23 +0.2 2,883,357 + Dshi_2721 0.38 +0.4 2,883,390 - Dshi_2721 0.40 +0.4 2,883,429 - Dshi_2721 0.42 -0.7 2,883,511 + Dshi_2721 0.46 -0.5 2,883,572 + Dshi_2721 0.50 -0.5 2,883,654 + Dshi_2721 0.54 +0.2 2,883,678 + Dshi_2721 0.55 -2.3 2,883,824 + Dshi_2721 0.63 +3.2 2,884,133 - Dshi_2721 0.80 +0.6 2,884,203 - Dshi_2721 0.84 -0.8 2,884,345 + -0.1 2,884,549 + +1.2 2,884,635 - Dshi_2722 0.13 -0.2 2,884,650 + Dshi_2722 0.17 -0.6 2,884,687 + Dshi_2722 0.28 -0.4 2,884,754 - Dshi_2722 0.47 -1.0 2,884,778 - Dshi_2722 0.54 -1.2 2,885,017 - -1.3
Or see this region's nucleotide sequence