Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4426

Experiment: BHIS with Fusidic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.004 mg/ml
5,828,169	-				-1.9
5,828,176	-				+1.0
5,828,185	-				-1.1
5,828,185	-				+0.5
5,828,274	+				+0.7
5,828,451	+		BT4425	0.35	-1.6
5,828,638	+		BT4425	0.61	+0.2
5,828,863	-				+0.1
5,828,886	-				-2.1
5,828,893	+				+0.4
5,828,938	-				+0.8
5,828,938	-				-0.2
5,828,938	-				-0.6
5,829,007	+				-2.1
5,829,007	+				-2.2
5,829,084	-				-0.2
5,829,125	-				-0.5
5,829,173	+				+1.4
5,829,211	-				+2.4
5,829,330	-		BT4426	0.14	-1.4
5,829,617	-		BT4426	0.26	-2.3
5,829,702	+		BT4426	0.29	-1.2
5,829,797	-		BT4426	0.33	+0.1
5,829,858	-		BT4426	0.35	-0.6
5,829,858	-		BT4426	0.35	+0.9
5,829,887	+		BT4426	0.36	-1.2
5,829,898	+		BT4426	0.37	-1.9
5,829,898	+		BT4426	0.37	-1.8
5,829,899	-		BT4426	0.37	+0.5
5,829,918	-		BT4426	0.38	-2.3
5,829,958	-		BT4426	0.39	-1.2
5,829,975	-		BT4426	0.40	-1.6
5,830,110	-		BT4426	0.45	-0.1
5,830,167	-		BT4426	0.47	-4.2
5,830,167	-		BT4426	0.47	-0.9
5,830,244	+		BT4426	0.50	+1.1
5,830,254	+		BT4426	0.51	-1.3
5,830,255	-		BT4426	0.51	-0.4
5,830,266	-		BT4426	0.51	-2.5
5,830,323	-		BT4426	0.54	-1.0
5,830,489	-		BT4426	0.60	-2.3
5,830,490	+		BT4426	0.60	-0.6
5,830,513	-		BT4426	0.61	-2.0
5,830,513	-		BT4426	0.61	+0.4
5,830,721	-		BT4426	0.69	-2.0
5,830,721	-		BT4426	0.69	+0.4
5,831,109	+		BT4426	0.85	+1.4
5,831,227	-		BT4426	0.89	-1.6
5,831,249	+				+1.4
5,831,400	+				+1.4
5,831,464	-				+0.2
5,831,514	+				+1.0
5,831,525	-				+0.1
5,831,534	-				-1.7
5,831,774	+		BT4427	0.15	-2.3
5,831,827	+		BT4427	0.18	-0.3
5,831,840	-		BT4427	0.19	+1.5
5,831,846	+				+0.4
5,832,041	-		BT4427	0.30	-1.3
5,832,156	-		BT4427	0.37	-2.8
5,832,344	-		BT4427	0.47	+0.4
5,832,344	-		BT4427	0.47	-2.4
5,832,358	-		BT4427	0.48	-2.1
5,832,388	+		BT4427	0.49	+0.1
5,832,389	-		BT4427	0.49	+0.0
5,832,389	-		BT4427	0.49	-1.8
5,832,496	-		BT4427	0.55	-1.2
5,832,496	-		BT4427	0.55	+0.4
5,832,496	-		BT4427	0.55	-1.1
5,832,497	+		BT4427	0.56	-0.9
5,832,498	-		BT4427	0.56	-0.2
5,832,498	-		BT4427	0.56	+1.2