Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4262

Experiment: BHIS with Fusidic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.004 mg/ml
5,610,665	-				-0.1
5,610,705	-				-2.0
5,611,183	-		BT4261	0.12	+0.1
5,611,254	-		BT4261	0.25	-0.7
5,611,254	-		BT4261	0.25	+1.8
5,611,257	-		BT4261	0.26	+0.3
5,611,379	-		BT4261	0.50	-1.1
5,611,414	-		BT4261	0.57	+1.5
5,611,414	-		BT4261	0.57	-1.1
5,611,414	-		BT4261	0.57	+1.6
5,611,418	-		BT4261	0.58	+0.9
5,611,496	-		BT4261	0.73	-1.1
5,611,496	-		BT4261	0.73	-0.2
5,611,511	-		BT4261	0.76	+2.8
5,611,568	-		BT4261	0.87	+0.4
5,611,613	-				+0.5
5,611,660	-				+0.2
5,611,660	-				-0.9
5,611,729	-				+0.7
5,611,791	-				-1.4
5,611,862	-		BT4262	0.10	+1.2
5,611,862	-		BT4262	0.10	+1.0
5,611,870	-		BT4262	0.11	+2.9
5,611,873	-		BT4262	0.11	-1.7
5,611,873	-		BT4262	0.11	+1.8
5,611,916	-		BT4262	0.13	-0.1
5,611,916	-		BT4262	0.13	-0.1
5,611,986	-		BT4262	0.16	+1.8
5,612,065	-		BT4262	0.20	-0.1
5,612,103	-		BT4262	0.22	+0.4
5,612,156	-		BT4262	0.24	+0.4
5,612,223	-		BT4262	0.28	+0.5
5,612,238	-		BT4262	0.28	+0.9
5,612,373	-		BT4262	0.35	+0.8
5,612,373	-		BT4262	0.35	-0.1
5,612,373	-		BT4262	0.35	-0.1
5,612,409	-		BT4262	0.37	-1.6
5,612,479	-		BT4262	0.40	+1.7
5,612,514	-		BT4262	0.42	+1.0
5,612,684	-		BT4262	0.50	+0.2
5,612,692	-		BT4262	0.50	-0.6
5,612,695	-		BT4262	0.50	-1.1
5,612,695	-		BT4262	0.50	+1.4
5,612,791	-		BT4262	0.55	-1.7
5,612,819	-		BT4262	0.56	+0.6
5,612,821	-		BT4262	0.56	-1.4
5,612,821	-		BT4262	0.56	+0.4
5,612,823	-		BT4262	0.57	-0.8
5,612,823	-		BT4262	0.57	+0.7
5,612,863	-		BT4262	0.59	-1.9
5,612,872	-		BT4262	0.59	-1.0
5,612,872	-		BT4262	0.59	+0.1
5,612,879	-				+2.0
5,612,889	-		BT4262	0.60	+4.2
5,612,889	-		BT4262	0.60	-0.3
5,612,972	-		BT4262	0.64	+2.4
5,612,972	-		BT4262	0.64	+0.8
5,612,975	-		BT4262	0.64	-1.0
5,612,977	-		BT4262	0.64	+3.0
5,613,074	-		BT4262	0.69	+1.0
5,613,279	-		BT4262	0.79	+1.4
5,613,294	-		BT4262	0.79	+1.0
5,613,447	-		BT4262	0.87	+1.0
5,613,470	-		BT4262	0.88	+0.4
5,613,470	-		BT4262	0.88	+0.5
5,613,476	-		BT4262	0.88	+1.3
5,613,534	-				+0.0
5,613,568	+				+0.3
5,613,711	-				+2.2
5,613,711	-				+0.3
5,613,727	-				+0.4
5,613,732	-				+1.2
5,613,735	-				+1.2
5,613,744	-				-2.1
5,613,773	-				+0.4
5,613,803	-				-2.3
5,613,816	+				-0.6
5,613,817	-				-0.9
5,613,838	+				+0.0
5,613,839	-				-0.4
5,613,893	-				+1.6
5,613,912	-				-0.9