Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2395

Experiment: BHIS with Fusidic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.004 mg/ml
2,990,103	-		BT2394	0.53	-1.8
2,990,173	+		BT2394	0.57	+3.1
2,990,214	-		BT2394	0.59	+0.9
2,990,214	-		BT2394	0.59	-0.5
2,990,214	-		BT2394	0.59	+0.3
2,990,218	-		BT2394	0.59	+0.6
2,990,263	+		BT2394	0.62	+1.3
2,990,380	+		BT2394	0.67	-1.0
2,990,426	-		BT2394	0.70	-0.7
2,990,428	-		BT2394	0.70	-2.0
2,990,440	+		BT2394	0.70	-2.2
2,990,442	+		BT2394	0.71	+1.2
2,990,442	+		BT2394	0.71	-2.4
2,990,443	-		BT2394	0.71	-1.8
2,990,443	-		BT2394	0.71	+0.3
2,990,455	+		BT2394	0.71	+0.9
2,990,458	-		BT2394	0.71	-0.2
2,990,478	+		BT2394	0.72	-0.5
2,990,529	-		BT2394	0.75	-1.5
2,990,618	-		BT2394	0.79	-1.5
2,990,630	-		BT2394	0.80	+1.5
2,990,654	-		BT2394	0.81	-1.6
2,990,654	-		BT2394	0.81	+1.3
2,990,782	+		BT2394	0.88	-0.6
2,990,782	+		BT2394	0.88	-2.2
2,990,783	-		BT2394	0.88	-2.8
2,990,783	-		BT2394	0.88	+0.6
2,990,835	-				-0.5
2,990,882	-				-0.7
2,990,884	-				+0.9
2,990,904	+				-2.1
2,990,905	-				-0.5
2,990,905	-				-1.1
2,990,908	+				+1.3
2,990,939	-				-1.9
2,990,939	-				+0.6
2,990,939	-				-1.9
2,991,023	-				-1.2
2,991,056	-				+1.5
2,991,056	-				-0.2
2,991,076	-				+1.0
2,991,089	+				-0.3
2,991,090	-				-1.9
2,991,098	+				-1.1
2,991,166	+				-0.1
2,991,221	+		BT2395	0.16	-1.6
2,991,221	+		BT2395	0.16	+0.0
2,991,273	+		BT2395	0.22	-1.6
2,991,285	-		BT2395	0.23	-2.0
2,991,337	+		BT2395	0.29	-1.4
2,991,337	+		BT2395	0.29	+1.5
2,991,338	-		BT2395	0.29	+1.5
2,991,350	-		BT2395	0.30	-1.1
2,991,350	-		BT2395	0.30	-0.3
2,991,376	+		BT2395	0.33	+0.1
2,991,377	-		BT2395	0.33	-2.2
2,991,401	+		BT2395	0.36	-3.1
2,991,402	-		BT2395	0.36	+0.2
2,991,476	+		BT2395	0.44	-0.8
2,991,508	+		BT2395	0.48	-1.5
2,991,509	-		BT2395	0.48	+0.2
2,991,568	-		BT2395	0.55	-0.3
2,991,672	+		BT2395	0.66	-0.5
2,991,682	-		BT2395	0.67	-1.8
2,991,715	+		BT2395	0.71	-1.9
2,991,715	+		BT2395	0.71	-3.6
2,991,767	+		BT2395	0.77	-1.3
2,991,792	-		BT2395	0.79	-0.1
2,991,883	+		BT2395	0.90	+0.5
2,991,884	-		BT2395	0.90	-1.4
2,991,884	-		BT2395	0.90	+0.4
2,991,918	+				+1.1
2,991,918	+				+0.3
2,991,919	-				+1.5
2,991,936	-				+0.9
2,991,938	-				+0.2
2,992,159	-				+0.4
2,992,159	-				-0.2
2,992,215	-				-1.4
2,992,215	-				-0.8
2,992,237	+				-1.1
2,992,237	+				+0.5
2,992,260	-				+1.3
2,992,260	-				-0.8
2,992,290	-		BT2396	0.13	-1.1
2,992,290	-		BT2396	0.13	+1.0
2,992,290	-		BT2396	0.13	-0.1
2,992,293	+		BT2396	0.14	+0.0
2,992,293	+		BT2396	0.14	+0.7
2,992,294	-		BT2396	0.14	+1.0
2,992,341	+		BT2396	0.22	+0.5
2,992,360	-		BT2396	0.26	+1.0
2,992,360	-		BT2396	0.26	-1.3
2,992,360	-		BT2396	0.26	-0.4
2,992,383	+		BT2396	0.30	+0.1
2,992,387	-		BT2396	0.30	-1.0
2,992,404	+		BT2396	0.33	-0.3
2,992,459	+		BT2396	0.43	+0.2
2,992,460	-		BT2396	0.43	-1.3
2,992,460	-		BT2396	0.43	-1.6
2,992,460	-		BT2396	0.43	-0.2
2,992,460	-		BT2396	0.43	-0.1
2,992,463	+		BT2396	0.44	+0.0
2,992,479	+		BT2396	0.47	-0.3
2,992,490	-		BT2396	0.49	-0.5
2,992,677	+		BT2396	0.81	+1.5
2,992,679	+		BT2396	0.82	+1.5
2,992,679	+		BT2396	0.82	-0.8
2,992,679	+		BT2396	0.82	+4.2
2,992,680	-		BT2396	0.82	-1.3
2,992,683	+		BT2396	0.83	-0.5
2,992,683	+		BT2396	0.83	-0.1
2,992,713	+		BT2396	0.88	-1.3
2,992,730	+				+0.3
2,992,732	+				+0.9
2,992,733	-				-1.1
2,992,733	-				+1.1
2,992,793	+				-0.3
2,992,793	+				-1.1
2,992,794	-				+0.7
2,992,796	-				+0.3
2,992,796	-				-0.5
2,992,796	-				-0.7
2,992,798	-				-0.8
2,992,812	+				-0.5
2,992,908	-		BT2397	0.21	-0.2
2,992,909	+		BT2397	0.21	+0.8
2,992,909	+		BT2397	0.21	+0.2
2,992,910	-		BT2397	0.21	-0.2
2,992,939	+		BT2397	0.26	-0.1
2,992,939	+		BT2397	0.26	+0.1
2,992,970	+		BT2397	0.31	-0.5
2,992,972	+		BT2397	0.31	+0.2
2,992,973	-		BT2397	0.31	-0.4