Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2161

Experiment: BHIS with Fusidic 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Fusidic 0.004 mg/ml
2,720,115	+		BT2160	0.48	-2.3
2,720,116	-		BT2160	0.48	-2.1
2,720,116	-		BT2160	0.48	+0.9
2,720,116	-		BT2160	0.48	+2.1
2,720,191	+		BT2160	0.53	-0.5
2,720,191	+		BT2160	0.53	+0.4
2,720,191	+		BT2160	0.53	-0.2
2,720,192	-		BT2160	0.53	+1.4
2,720,245	-		BT2160	0.56	-1.8
2,720,254	+		BT2160	0.57	+1.8
2,720,255	-		BT2160	0.57	+1.4
2,720,265	+		BT2160	0.57	-1.6
2,720,269	+		BT2160	0.57	-0.4
2,720,269	+		BT2160	0.57	-1.2
2,720,279	+		BT2160	0.58	-0.4
2,720,343	+		BT2160	0.62	-1.4
2,720,349	+		BT2160	0.62	-1.7
2,720,350	-		BT2160	0.62	+0.8
2,720,365	+		BT2160	0.63	-1.6
2,720,381	-		BT2160	0.64	-0.5
2,720,398	-		BT2160	0.65	+0.4
2,720,463	+		BT2160	0.69	-1.0
2,720,482	-		BT2160	0.70	-0.2
2,720,482	-		BT2160	0.70	-2.0
2,720,485	+		BT2160	0.70	-0.6
2,720,493	+		BT2160	0.71	-1.0
2,720,494	-		BT2160	0.71	+3.5
2,720,561	-		BT2160	0.75	+0.1
2,720,563	-		BT2160	0.75	-0.5
2,720,582	+		BT2160	0.76	-0.6
2,720,583	-		BT2160	0.76	-2.3
2,720,583	-		BT2160	0.76	+0.3
2,720,583	-		BT2160	0.76	-3.3
2,720,664	+		BT2160	0.81	+0.3
2,720,665	-		BT2160	0.81	+1.4
2,720,665	-		BT2160	0.81	+1.4
2,720,681	+		BT2160	0.82	-0.6
2,720,682	-		BT2160	0.82	+0.9
2,720,682	-		BT2160	0.82	-0.8
2,720,683	+		BT2160	0.82	-1.7
2,720,683	+		BT2160	0.82	-1.7
2,720,695	+		BT2160	0.83	-0.6
2,720,697	+		BT2160	0.83	-3.7
2,720,725	+		BT2160	0.84	+1.4
2,720,725	+		BT2160	0.84	-2.3
2,720,725	+		BT2160	0.84	-2.7
2,720,726	-		BT2160	0.85	+1.9
2,720,822	+				-2.2
2,720,871	+				-3.2
2,720,872	-				+1.8
2,720,928	+				-4.5
2,720,929	-				-2.2
2,720,950	+				-3.0
2,720,951	-				+0.2
2,720,953	+				-4.2
2,720,953	+				-4.0
2,720,965	+				-3.7
2,720,981	-				+1.4
2,721,009	-				-1.8
2,721,011	-				-2.7
2,721,018	-				-1.6
2,721,041	-				-3.7
2,721,208	-		BT2161	0.41	-1.2
2,721,211	-		BT2161	0.41	-4.2
2,721,364	-		BT2161	0.76	-0.2
2,721,430	-				-2.1
2,721,430	-				-1.0
2,721,443	-				-1.8
2,721,505	-				-2.1
2,721,505	-				-0.6
2,721,509	-				+0.4
2,722,206	+				-0.4
2,722,211	+				+0.2
2,722,299	-				-0.2
2,722,300	+				-2.0